Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02286 ATGGAGTTCAATTCCCAAAACAATAACAAATCTGAGATAAGATGGAGCTCAGATGATCAAGGTGGTCTTGGACAAGTGAAATCTTATTCTTGTTCCTTTTGCAGAAGAGGGTTCTCAAACGCACAGGCACTAGGAGGCCACATGAACATCCATAGAAGAGATAGGGCCAAGCTCAAGCAATCTTCTGAGGAAAGCACTCTTTCATTGGACATCTCAATCAAGACCACAAGTGATCATAGTAATGACCCTTCTGATTTGGAAGAGAAAATTTTGTTTCGGTTGGGTTCTGGTGAAGATCAGAAGCATGCTAGGAACCATAAAATGCCATTCACTTTTACTCAAAATGAAAATCATGATCATGCACCTCAGAGGGGCATGTTAATTGGTACTACAGAAATTCCCCATCTCCCTTCTTTTGTTTTGGGACAGATGGTTGAAGAAAAGAAAGCTGAATTAGACCTTGAGCTTAGGCTAGGGCTTTATCCTCGGGAGTCAGCAACATTGAACACTAGGTCTTTCTTTTGA 525 0.4114 MEFNSQNNNKSEIRWSSDDQGGLGQVKSYSCSFCRRGFSNAQALGGHMNIHRRDRAKLKQSSEESTLSLDISIKTTSDHSNDPSDLEEKILFRLGSGEDQKHARNHKMPFTFTQNENHDHAPQRGMLIGTTEIPHLPSFVLGQMVEEKKAELDLELRLGLYPRESATLNTRSFF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02286 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Pste5g02286 174 MobiDBLite consensus disorder prediction 1 23 - -
Pste5g02286 174 Gene3D Classic Zinc Finger 5 85 - -
Pste5g02286 174 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Pste5g02286 174 SUPERFAMILY beta-beta-alpha zinc fingers 27 55 IPR036236 -
Pste5g02286 174 PANTHER OS07G0101800 PROTEIN 9 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02286 Pste-Chr5 15404031 15404555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02286 23 60 C2H2 Transcription Factor Family AT3G09290 84.211 6.95e-18 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste5g02286 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02286 5 15404031 15404555 Pste5g02286 5 15404031 15404555 ECH