Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02281 ATGGCCGAAGAGCACCGATGCCAAGCTCCCGAAGGTCACAGACTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCTGCAACCATGAATCTCTGTTCCAAATGCTACAGAGACATCCGTTTGAAGGAACAAGAACAAGCCAAAACCAAATCCACCATCCAATCCGCTCTCTCTTCATCATCCTTATCCTCACCACTCCTACCCGCCGCCGTTTCTCTCCTGCCGCCCGTCCAATCCCTCCCTCAGCCGCCGGTTCTCTCCGCCGCCGATGCCAGCGCACCGCTCCAGCCCACCCGCTGCGGCCAGTGTCGGAAGCGCGTCTCCTTGACCGGCTTCAAGTGCAGGTGCGGAACCACGTTTTGTGGGACCCACCGGTACCCCGAGAAACACGCTTGTCACTTCGATTTCAAAGCGGTTGGCAGAGAGGAGATAGCACGGGCTAATCCCGTGATCAAAGCCGACAAGCTACGGAGGATTTAA 480 0.5771 MAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYRDIRLKEQEQAKTKSTIQSALSSSSLSSPLLPAAVSLLPPVQSLPQPPVLSAADASAPLQPTRCGQCRKRVSLTGFKCRCGTTFCGTHRYPEKHACHFDFKAVGREEIARANPVIKADKLRRI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02281 159 FunFam Zinc finger AN1-type containing 6 78 155 - -
Pste5g02281 159 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Pste5g02281 159 Gene3D - 1 64 - -
Pste5g02281 159 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Pste5g02281 159 SMART AN1_Zf_4 100 137 IPR000058 GO:0008270
Pste5g02281 159 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Pste5g02281 159 SUPERFAMILY AN1-like Zinc finger 95 154 IPR035896 -
Pste5g02281 159 Gene3D - 77 155 IPR035896 -
Pste5g02281 159 ProSiteProfiles Zinc finger AN1-type profile. 94 140 IPR000058 GO:0008270
Pste5g02281 159 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 159 - -
Pste5g02281 159 Pfam AN1-like Zinc finger 100 136 IPR000058 GO:0008270
Pste5g02281 159 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02281 Pste-Chr5 15371306 15371785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02281 1 159 C2H2 Transcription Factor Family AT3G52800 51.705 7.78e-51 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02281 5 15371306 15371785 Pste5g02281 5 15371306 15371785 ECH
Pste5g02281 5 15371306 15371785 Pste4g02436 4 17338503 17339024 PCT