Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02267 TTATAGTAGAAAACCAAAGCTTTGTGGGTTGTGTGGACTTTTTTTTAGTGCAAAAGACAAAGTGCCACCCCTCTTTCTTTTTCTTCCCACTTTTTCTACCTTCTTGGCTTATTGATTATCCATCAAAATCTCTTCTTTTTTAAGTGGGTTGGGGTGTTTCATTTTGCTTCTTTCTCATGGAGTGTAATGAATTTGTGTATGGTGAAATTCTTTGATTACACTGTCAACAGTAGAAGTGGATGTATGTTCTTCCATGTTGAGCTGTTTTGAGGCTTAATTCTTAGTTTATGCCTCTTGGGGTTTTCTTTTAAAATTACTTTTCTGGAATTTGTCTGCAAGTTGCTTCAAAATGGCACAAAAGATGGAAATAGTGAGCACTTCTGGTCATCATTGATTGCGACAGCACGGCTCTAAACACATACTTTCTCATAGTTTTGTGTTGGATGAGCCAAGCTATGGTTATTTTTATGCTCCTTAGTACAACAGGGCCACCAATCAAAAGAAGAGCGGGTTTGAGAATTAAGCAAGCAGGTAGAGGTTCATACCGAGGAAGCTAGGTGTTTGTTTGAAGTTGTTATCGGGTTGTCTTTTGTGTTTCTTTCTTTTGCATAGTCCTGGAAAGTAGAACAGATGGAAGCCACTTCTATAACGCAGTTGTTGAAGGGCTTTTGTGATCACACACAATGGAAATATGCTGTTTTTTGGAAGCTTCACCACCATTTTCCTAAGACTTTGACCTGGGAAAATGGTTACCAGAAAAGAGATGTGATTGAGGAAAGCATGTCGGGTGACATCAATTTCAAATCCCCAGATGAGTTATATTCTTCAGGCAGTGAAAGTACTGATTGTTCTGGAGATTATTCGGCTCGACTGCTCATGATTGAAATGTCTCATAAAAAATACAGCTTTGGAGAAGGGGTTGTTGGCAAAATAGCTCTTGCCAGGGATCATTGTTGGGTTTCCTGTGAAGATATTCTCACCAGTAAATTTGACACTGATTTAATCTCTGAGTGTCCTGATGAGTGGCTTCTCCAATTTGCTTGTGGCATCAAGACTATTTTGTTGGTACCAGTTCTTCCGCTAGGGGTTTTGCAGTTCGGTTCATTTGAAGCGGTTGCTGAAGACCTGGAATTTGTAACCTATATCAGGGAGAAATTCCATTCCATTCAGCTTCTGGAAGAAAATATTGCCCCTTTAAACTTGGGAACTGATTATCAAGAGTGGGCATTCTCCGACCTAGTGCATAATTTGATGGATAGCTTGGATGAATCATCTTCAGTTACAAAAGGTATATTGAAAAGTGAAGTTTCAAATAGTACTGTTGCACTCAATTCAAACAGTTCAAGGTTGAACCCAACAATGCTATCATTTATTCAGGATGACAGTTGCTTGTCTAACAAAAATATTTTAAAATCTCTAAAAAGAGCTAATAAAAATGAAATAGGTTCCTCGTCTATTGAGATGCCAACTGTTCCAAGACATATTGGTAAGGTGGAGACAAAATCAAGTCATGTGGAAGAAGAGATATGGTCCTGGTCTCACTTGGTCAACAACGTGGGAGTATTTGGAGAGATGTCAAATGGATTAGACTCTTTTTCTGTTAAAAATTTTACAGAGAAGAAATTTGGAGGCACCGAATCTGATCATTATGATGTCAAGAAAGAAAATGACTTCACTTTTCCCTCAGAGTGTGAATTGTACAAAGCACTTGGATCAATTACATATGGAGAAACAGGCAAATCTAGGACAAAATGTGTCTCTGTTGAGGAAACCTACAGTAATTCAATTCTTGTAACTAACAAAAAAGAGCATGATCATATTAAAGGTTTGGAGTTTCCCCATGATTTTGATCCAGAATATCTTTTAGATGCTGTTGTTGGCAATTTATGTGGTGCTGCAGATGATATTTCAAGTATATCCAACAGTGTCAGATGTGAAAAAGATCCTATGCCTGCGGTTATGGTTAAGGACAAATATGGTCTTTCAAACCATTTTACATCATCTTTTGATGGAAATACAAGTTTATTGATTGACAAGGCACAGCAGAAAAAAGCTAATAGTCATATGCAGCCTATTAGTGGACCAAAGCTCTCTAGCACAAGCAAGAAAAGAACAAGAGTTGGTAACAACCAAAAGTCTAGGCCAAGAGATCGACAGCTGATCATGGACAGAATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGTAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTATACTTGAGCAAGATAACAAGCCAGGCCGAGAAGCTGAAACGATTAGCCAATCGGGCGGTTCCTGAGTGCAAGAGACAAAAAGTCAATGGTAGCTACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAACTATCTTGGCCTATAGTCATAGAAGATCTGGAATGCTCAGGGCACATGCTCATAGAGATGATATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAGGTGATCCGCAAGCTGGATGTTACCATCTTGAAAGGGATCTTGGAAAACCGTTCAAGCAACAGCTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGGATGGATGTCCTATGTCCTTTACTGCATCTTCTGCAGCTTAGGAGAAACCCTGTCTCGTATAAAAGCTGACCCTACCATACCGGTTCTCAGCTTCAAATGACAACTTCTATTTAAAAAAGTTGTGATAATATTTGAGAGGGACTTGTGTAATGGTGTAAATGATTGTGTTTATGCTCTCAATGCTGCATTTTGGTGTTTGATTATGAGCTAGTACCTGTACCTTAATATATAAACAAGGGCACTATAGAGTGCTACTGGCTGCAGAAGAATATGCCTAGCAGCTAGCTTTGAACTCATTTCGGGTGTGGCATCATTATGACCTAAATAGAGAACAAGAAGTTGTTTGCTAGAAAAGTAGAACCTTTACCGCAGAATAATATATGAGTGGATTGAATTTAGTGTTTTATAAAAGGCTACACCAAATTGTTGAAATGAAATAGTC 3034 0.3902 MEATSITQLLKGFCDHTQWKYAVFWKLHHHFPKTLTWENGYQKRDVIEESMSGDINFKSPDELYSSGSESTDCSGDYSARLLMIEMSHKKYSFGEGVVGKIALARDHCWVSCEDILTSKFDTDLISECPDEWLLQFACGIKTILLVPVLPLGVLQFGSFEAVAEDLEFVTYIREKFHSIQLLEENIAPLNLGTDYQEWAFSDLVHNLMDSLDESSSVTKGILKSEVSNSTVALNSNSSRLNPTMLSFIQDDSCLSNKNILKSLKRANKNEIGSSSIEMPTVPRHIGKVETKSSHVEEEIWSWSHLVNNVGVFGEMSNGLDSFSVKNFTEKKFGGTESDHYDVKKENDFTFPSECELYKALGSITYGETGKSRTKCVSVEETYSNSILVTNKKEHDHIKGLEFPHDFDPEYLLDAVVGNLCGAADDISSISNSVRCEKDPMPAVMVKDKYGLSNHFTSSFDGNTSLLIDKAQQKKANSHMQPISGPKLSSTSKKRTRVGNNQKSRPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLSKITSQAEKLKRLANRAVPECKRQKVNGSYPGRSCAFDFESELSWPIVIEDLECSGHMLIEMICNEHGLFLEIAQVIRKLDVTILKGILENRSSNSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPVSYKS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02267 676 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 495 544 IPR011598 GO:0046983
Pste5g02267 676 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 337 671 IPR043561 GO:0003700|GO:0006355
Pste5g02267 676 MobiDBLite consensus disorder prediction 470 496 - -
Pste5g02267 676 MobiDBLite consensus disorder prediction 470 509 - -
Pste5g02267 676 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 176 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02267 Pste-Chr5 15281241 15288148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02267 1 670 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 29.275 6.00e-69 237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02267 5 15281241 15288148 Pste5g02267 5 15281241 15288148 ECH