Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02261 CTAAAGAATGCAGGTCTCATTATACAAGTGAAAATATCAAAACCCTAGAACCCGATTGTCGGCAACCCAATTTCAGATCGCGCATTCTGCTCTATACTAACATTTTGGGGCAAAATGAAGGTTATCGCCGCCTACTTGCTCGCCGTTTTGGGAGGCAACGCCGCCCCTTCCGCCGATGACTTAAGAGTCATTCTTGGCTCAGTTGGAGCAGATTCGAATAATGACAATATCAGTAACTTCTTATCAGAAGTGAAGGGCAAAGACATTACCGAGCTTATCGCCGCCGGTCGGGAAAAGTTGGCCTCAGTGCCATCCGGAGGTGGCGCCGCCGTGGCCGCCGCTCCCAGCGGAGGCTCGGGTGTTGCTGCTCCGGCTGCCGCCGAATCTAAGAAGGAGGAAAAGGTGGAAGAGAAGGAGGAATCAGATGACGATATGGGCTTCAGTCTGTTTGATTAATTGGCAGGCTTTTCAGTCTTTGTTGGGAACATATTATCAACTTGGAGTTTAGTTTTGCCATTTTTGTTTTTGGTTGAAAGTAGCATTCAAAGCCAATGAATTGTGTGGTTGAAAGATTTCGGTTTAATATTGATTACTTTTGCTATTTTGGTGAACATACTTCTCTTCCGTCATTTACTCTTATATGTTATTCTTTGTTTTGTTTTTCCTGGGTGGACGTTTCTTTAATTGGAATTCAGCATGTGTTTACCGTCTCGAATGAATGCTATAGAAGAGTACTTTAGAATTGCAA 748 0.4425 MKVIAAYLLAVLGGNAAPSADDLRVILGSVGADSNNDNISNFLSEVKGKDITELIAAGREKLASVPSGGGAAVAAAPSGGSGVAAPAAAESKKEEKVEEKEESDDDMGFSLFD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02261 113 MobiDBLite consensus disorder prediction 68 113 - -
Pste5g02261 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pste5g02261 113 Pfam 60s Acidic ribosomal protein 18 112 - -
Pste5g02261 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pste5g02261 113 FunFam 60S acidic ribosomal protein P2 1 59 - -
Pste5g02261 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pste5g02261 113 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02261 Pste-Chr5 15224880 15225843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02261 1 113 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.027 4.48e-31 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02261 5 15224880 15225843 Pste5g02261 5 15224880 15225843 ECH