Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02260 CTGCTCCAAACTGTGGTGACCAATCCTACAAAATTCGAACTCTTCTTCGACTCCATCAACGGTTCCTCTTATGCCATCACCAACATCAACCCCTCAACGCAGCGTTTCTCAAACAACTCATGCATGTCCACTGATTTTCCAAACGGAGGAATGTGGCTAGACACCAACTCCCCCTTCAACATCACCCCCAGCAACACATTAATCCTCTTAAACTGCTCTAACAACGTCTTCACCATTTTGTGGAACTGCTCCTTCTCCAGCATTTGCCAAAAGTACGTAAAGGAAAATTATGTGACAGCAAAAGCTTGCCGTGCCTCGCAAACATGCTGTCACATCAAGACTGGTGGGTCTGTTACAGCTTATAGAAATAGGGCAAGGTGTTCACCGTATGTTAGCTTTCCGAATTTGGATTCTTCTTTGCCGGTGAGTATGTGGCGGCCAGGGGTGGAGATTGAGTGGCAGCAGCCGGAGGAGCCGCCGTGTGAAGTGGATTTGCACTCAAGTGACTCAACCACATCTGTTTATCAAGAAGATCCAGAATCCAAAGTTTGCGGACAGGATGCTGCTGGCTGGTTTAATAATCACCAAAACAGCTTAGCATTGTTTGTGGGTGCCACGCTAACAGGATTGATCACTGCATTGGTGTTTTACCTTCGCAGGCAAAGGATCAAAATAGAAACCGAAGAGAGCCTAAGCAGGGCTCGTGAGATATTAAACGCAGGCAATAGTGGCAGATCAGCGAAGATCTTCACAATGAAAGAGATCACAAAAGCAACCAGCAACTTCTCCAAAGCCAACCTCTTAGGTTTTGGTGGCTTCGGTGAGGATGATGGAACCATCACAGCCATCAAGAGAGCCAAAGCAGGCAACACAAGAAGCATAGACCAAATCCTCGACGAGGTCAAAATCCTTTGCCAAGTTAACCACAGAAGCCTAGTGAGACTGTTGGGGTGTTGTGTTGAGCTTCCTGAACCACTTCTTGTGTATGAATATGTCCCCAATGGGACCCTTTTTGAGCACCTTCGTAACACAAACTCTGATCAAATTGGGTGGCATTCAAAACTAAGAATTGGACACCAAAGTGCTGAAGGATTTGCATATCTTCACAATGCAGCTGTGCTGAGAATTTACCATAGGGACATAAAGTCTAGTAACATTCTTTTGGATGATAACCTTGATGCCAAGGTTTCTGACTTTGGTCTTTCTAGGTTGGCTGTGAGTGAAGCAACTTACATGACAACTTGTGCTAAAGAGAGATTGGGGTATCTTGACGAGGAGTACTATGTGAACTTTCAGCTTACGGATAAGAGTGATGTGTATAGTTTTGGTGTGGTTTTGTTGGAGTTGTTGATTTCTAAGAAGGCTATTGATTTCAATAGGGAAGAGGAGGATGTAAACTTGGTGGTTATGATTAAGAGGGCTGTGAGGGAAGCAAGGTTGATGGATGTTGTTGATCCTATGTTCAAACGTGGAGGGAGTAGGTTGGAGTTGGAGAGTATGAAGGCGTTTGGGGCTCTTGCTGCTGCGTGCTTGAATGATAGGAGGCAGAATAAACCCTCCATGAAAGATGTTGCTGATGAGATTGAGTGCATTATTAGTATTCTTGCTGGTGCTAAGTGCGGGAATTGTGGTCCAAACCCGGTTCCGTACCCATTAAGCACGGGACCCGATTGTGGCGACCCGGGGTACAAGATCCGGTGTACCGCGGGCACACTTTGGTTTGATGCACTCTCCGGATCATCCTACATGATCAAATCCATTGACCCACTAACCCGTCGGATCATAGCGCAACCCGCCACGCTCACACCAAAGACGTGCATGTCCACGGACTTCCACAGCGAAGACATCCACCTGAACGAAACCCTTCCATTTAGCGTGGCTCCAGGCAACACTGTATTCCTCTTCAACTGCACCTCCCACGCGCCTTCGATGAACTGCTCCCCAAGCGGCGCGTGCCACAGTTACATTAAGGAGCATGTAGATTTTGGCGCGTGCGGGCGCGTGGGAGTGTGCTGCGAGTACAAGAGTGGTGGGCCCCGCAAAGAGTATGTGGTTCGGGTACACGGCGGAGAGTGCGCGGCGTATCAGAGTTTTGTGGATTTTAACGGGACGGCGGTGGCGGGGAATAGATGGCCGGAGCCGGGGGTGGGGATCGAGTGGGTGGGGCCTCAGGAACCGGTTTGTAAGGCGCCAACAGATTGCAATGTGTTGTTGAACTCGAAATGTGGAGTGGGCCCTGCTGGTGGTGCGCAAAGGTGCTTCTGCGATGCTGGGTTTAAATGGGAGTCGCTCAATGGCTTGTGTCAACCTCAAGTTCAGATTGTTGTTTCCTTGGGAGGAATAGTCTCTATTGTAGCAGTTATAGGAGGCATTTTCTACAAGAAGCATAATCAAGCAAAGACAAAAGCTAAGGAGGCCAAAATAAAAAAGATGAAAGAAATCTCAAGAGCAAAAGCGAGTGCTTTATCCTCCAGAATTTTCACTGGCAGAGAGGTAGGAAAAGCAACCAACAACTTCTCCCAAGAAAACCTCATTGGCTCTGGTGGCTTCGGTGAAGTCTTCAAGGGAACATTCGATGATGGAACCGTCTTTGCCATCAAGCGTGCCAAGCTTGGAAGCACAAAAGGCATTGATCAAATGCAAAACGAGGTCAGAATTCTCTGTCAAGTAAACCATAGAAGTTTAGTGAGACTCCTTGGTTGTTGCTTGGAACTTGAACACCCTTTACTAATATACGAGTACGTTTCAAATGGGACCCTTTTTGATTACCTTCATCGCCACTCTTCTGGCACAAGGGAACCCCTCAAATGGCACCAAAGACTCAAAATTGCACACCAAACAGCCGAAGGGCTTTCTTATCTGCATTCTGCAGCTGTGCCACCCATTTACCACCGTGACGTGAAATCAAGCAATATACTCCTTGATGACAAGCTTGATGCCAAAGTTTCTGATTTTGGGCTATCTAGGCTTGTTGAATTGGCTGAAGAGAACAAGAGCCATATTTTCACTAGTGCTCAAGGGACACTGGGGTACTTAGACCCTGATTATTACCGTAACTTTCAGTTGACTGATAAGAGTGATGTTTATAGCTTTGGAGTAGTGTTGATGGAGTTGCTTACTGCTCAAAAAGCTATTGATTTCAATAGGGAAGAAGAGAGTGTTAACTTGGCAATGTATGGGAAGAAGAAAATGGTTGAAGACAAGATGATGGATGTGGTTGATCCCTTGCTTAAAGAGGGAGCTAGTGATTTGGAATTGGAAACTATGAAGTCATTGGGGTATCTTGCTTCTGCATGCTTGGATGATCAGAGGCAAAAACGGCCTTCAATGAAAGAAGTTGCTGATCAGATTGAACACCTGATTAAAATTGTTAAA 3375 0.4646 LLQTVVTNPTKFELFFDSINGSSYAITNINPSTQRFSNNSCMSTDFPNGGMWLDTNSPFNITPSNTLILLNCSNNVFTILWNCSFSSICQKYVKENYVTAKACRASQTCCHIKTGGSVTAYRNRARCSPYVSFPNLDSSLPVSMWRPGVEIEWQQPEEPPCEVDLHSSDSTTSVYQEDPESKVCGQDAAGWFNNHQNSLALFVGATLTGLITALVFYLRRQRIKIETEESLSRAREILNAGNSGRSAKIFTMKEITKATSNFSKANLLGFGGFGEDDGTITAIKRAKAGNTRSIDQILDEVKILCQVNHRSLVRLLGCCVELPEPLLVYEYVPNGTLFEHLRNTNSDQIGWHSKLRIGHQSAEGFAYLHNAAVLRIYHRDIKSSNILLDDNLDAKVSDFGLSRLAVSEATYMTTCAKERLGYLDEEYYVNFQLTDKSDVYSFGVVLLELLISKKAIDFNREEEDVNLVVMIKRAVREARLMDVVDPMFKRGGSRLELESMKAFGALAAACLNDRRQNKPSMKDVADEIECIISILAGAKCGNCGPNPVPYPLSTGPDCGDPGYKIRCTAGTLWFDALSGSSYMIKSIDPLTRRIIAQPATLTPKTCMSTDFHSEDIHLNETLPFSVAPGNTVFLFNCTSHAPSMNCSPSGACHSYIKEHVDFGACGRVGVCCEYKSGGPRKEYVVRVHGGECAAYQSFVDFNGTAVAGNRWPEPGVGIEWVGPQEPVCKAPTDCNVLLNSKCGVGPAGGAQRCFCDAGFKWESLNGLCQPQVQIVVSLGGIVSIVAVIGGIFYKKHNQAKTKAKEAKIKKMKEISRAKASALSSRIFTGREVGKATNNFSQENLIGSGGFGEVFKGTFDDGTVFAIKRAKLGSTKGIDQMQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYVSNGTLFDYLHRHSSGTREPLKWHQRLKIAHQTAEGLSYLHSAAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPDYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKKKMVEDKMMDVVDPLLKEGASDLELETMKSLGYLASACLDDQRQKRPSMKEVADQIEHLIKIVK 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02260 1125 CDD STKc_IRAK 845 1123 - -
Pste5g02260 1125 Gene3D Phosphorylase Kinase; domain 1 796 914 - -
Pste5g02260 1125 ProSitePatterns Protein kinases ATP-binding region signature. 845 867 IPR017441 GO:0005524
Pste5g02260 1125 SUPERFAMILY Protein kinase-like (PK-like) 248 533 IPR011009 -
Pste5g02260 1125 ProSiteProfiles Protein kinase domain profile. 235 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02260 1125 Pfam Protein tyrosine and serine/threonine kinase 276 455 IPR001245 GO:0004672|GO:0006468
Pste5g02260 1125 FunFam Lectin-domain containing receptor kinase A4.3 332 535 - -
Pste5g02260 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Pste5g02260 1125 Gene3D Transferase(Phosphotransferase) domain 1 332 536 - -
Pste5g02260 1125 Gene3D Transferase(Phosphotransferase) domain 1 915 1124 - -
Pste5g02260 1125 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 539 1120 IPR045274 GO:0007166
Pste5g02260 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Pste5g02260 1125 FunFam Wall-associated receptor kinase-like 20 915 1125 - -
Pste5g02260 1125 SMART serkin_6 839 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02260 1125 SMART serkin_6 262 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02260 1125 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 811 914 - -
Pste5g02260 1125 SUPERFAMILY Protein kinase-like (PK-like) 817 1116 IPR011009 -
Pste5g02260 1125 Pfam Protein kinase domain 840 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02260 1125 Gene3D Phosphorylase Kinase; domain 1 236 331 - -
Pste5g02260 1125 ProSiteProfiles Protein kinase domain profile. 839 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02260 Pste-Chr5 15224415 15234012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02260 13 536 Receptor kinase-like Gene Family AT5G02070 46.988 1.97e-160 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste5g02260 Pkinase 1e-46 CL0016