Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02247 CGGCGGAGTTTGAGGGAGGCGTGGACGGCGGGGGCGGACGTGTTCAACGTGAGTGGTCGGCACACGCACGAGGACGACGAGGAACAACTCAAATGGGCCGCCATAGACCGCTTGCCAACTTTTGAACGCATGAGAAAAGGGGTGCTCAAGCACGTGCTCGACGATGGTCACGTGCTCCTCGATGAAATCGACGTTACCAACCTTGCCTCACACCACAAGAACCTCTTAATCAGCACCATACTTAAGATTGTTCAGGAAGATAATCACCAATTCCTGCGCACACTTAGAAATAGAGTAGACAGAGTGGGCATTGAAATTCCCAAGATTGAAGTCCGGTCTGAGAATTTATCTGTGGAGGGCGATGTGTATGTTGGGCACAGAGCTCTTCCTTCTCTGCTTAATGTTACTCTCAATGCTTTTGAGACTGTTCTGGGAACGTTTCACCTTGCACCGTCCAAGAAGAGGAAAATTCAAATTCTTAAAGGTGTTAGTGGAATCGTTAAACCGTCAAGGATGACTCTGCTATTGGGTCCTCCATCTTCTGGCAAAACAACATTGCTATTGGCGCTTGCAGGGAAACTTGATCGTGATTTAAGGGTGTCTGGGAGAATCACTTACTGTGGCCATGAGCTAAATGAATTTGTTCCACAAAAAACCTGTGCCTATATTAGTCAACACGACCTTCACTATGGAGAAATGACGGTGAGAGAAACATTAGATTTTTCAGGACGTTGTCTGGGTGTTGGTACTAGATATGAAGCTTTGGTGGAACTCTCAAGAAGGGAGAGAGAAGCAGGAATAAAGCCAGACCCTGAGATTGATGCTTTCATGAAGGCTATAGCAGTATCTGGCCAAAAAACCAGTTTGATGACAGATTATGTTCTTAAGATACTTGGGTTGGATATTTGTGCTGACATTATGGTCGGAGATGAGATGAGAAGGGGCATCTCTGGTGGACAGAAGAAGCGAGTAACAACAGGGGAGATGCTGGTAGGACCAGCAAAGGCACTATTTATGGATGAAATATCAACAGGGTTAGATAGTTCCACCACCTTTCAGATATGCAAGTTCATGAGGCAAATGGTTCATATAATGGACGTAACCATGGTGATTTCTCTTTTACAACCAACACCAGAGACGTTTGAACTCTTCGATGACATTATACTACTTTCAGAAGGTCAAATAGTATACCAAGGTCCACGTGAGAATGTGCTAGAGTTCTTTCAACACATGGGTTTCAACTGTCCTGAGAGAAAAGGAGTTGCTGATTTTTTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTAGAAAAGATGAACTTTACAGATACATTTCTGTTCCTGAATTTGTACAAGCTTTTAGTTCCTTTGGCATAGGAGAGCATCTTGCTACTGAGCTTGGGGTTCCCTATGATAAAAGTAGAACCCACCCAGCTGCCTTAGTGAGAGACAAGTATGGTATAACAAACTGTGAATTATTTAAGGCATGTTTTTCAAGAGAATGGCTACTTATGAAGCGTAGTTCTTTTGTTTATATATTCAAGACATCACAGATAACAATCGTTTCTATTATTACATTCACTGTGTTCCTTAGAACAAAAATGTCAGTGGGAACTGTTCAAGATGGACAAAAATTCTTGGGAGCATTATTCTTTAGTCTAATAAACGTAATGTTTAATGGGATGGCAGAACTAGCTATGACTGTTTTTAGGCTTCCTGTCTTTTACAAACAAAGGGATTTCAGGTTTTACCCTGCATGGGCATTTGGTTTGCCTATATGGATTCTCAGGATCCCTCTCTCCATTTTGGAATCGGGGATATGGATTGTCCTAACATATTACACAATTGGGTTTGCTCCTTCTGCTAGCAGGCAATTCTTGGTATTATTTTGCATTCATCAGATGGCTATCTCTCTATTTCGGTTCCTTGCCGCAGCTGGAAGAACACTAGTTGTTGCTAATACACTGGGTACCTTGTCCCTGCAATTGATATTTGTGCTAGGAGGTTTTGTTATTGCCAAGGATGACATTGAGCCGTGGATGATATGGGGCTATTATCTATCCCCTATGATGTATGGTCAGAATGCCATAGTAATGAATGAATTCTTAGATAAAAGATGGAGTAAACCCAATACAGACACTAGAATACATGCATCTACAGTTGGAAAGGTGCTTCTAAAATCTAGAGGCTTCTATACAGAAGAATATTGGTTTTGGATCTGCATTGGAGCCTTGCTTGGGTTTTCTCTACTCTTCAACCTCTTATTCATTGTTGCTTTAACTTATTTCAATCCTTTTGGTGATTCAAAAGCAGTCATTGTGGACGAAGGTGGCAAAAAGAATAAAAAGTCATCCTATATGCTTGAAGGTACAGACAAAGCAGTGAAAAATTCTTCAGAAATTGATACTTCTTCAAACCAAGAAGCAAGAAGAGGAATGGTTCTACCGTTTCAACCACTTTCACTTGCATTCAACCATGTTAGCTATTACGTAGATATGCCTGTAGAAATGAGGAGTCAAGGAATCAATAAAGATCGACTTCAACTACTACAAGACGTTAGTGGGGCTTTCAGACCAGGCGTATTGACAGCACTTGTGGGTGTTAGTGGTGCTGGGAAGACAACCCTTATGGACGTATTGGCTGGAAGAAAAACAAATGGTTACATTGAAGGAAGTATTAGCATCTCAGGTTACACGAAGAACCAAACAACATTTGCTCGTGTCAGCGGTTATTGTGAACAGAATGACATTCATTCTCCAAATGTTACGGTATATGAATCACTATTATTTTCAGCATGGCTTCGCCTCCCTTCAGATGTAACTGTACAAACGCGGAAGATGTTTGTTGAAGAAGTTATGGAATTGGTTGAGCTTAACCAAATCAAAGATGCACTTGTGGGTCTTCCAGGAGTGGATGGTCTATCAACAGAACAAAGGAAAAGGCTTACTATTGCAGTAGAACTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCAACATCCGGCCTTGATGCTAGAGCCGCAGCTATTGTTATGCGAACTGTGAGAAATACAGTAGACACGGGGAGAACTGTTCTGTGCACAATTCATCAACCAAGCATAGACATTTTGAAGCTTTTGATGAGGTATCTTCTGTTGCTGAAAAGAGGAGGGCAAGTTATCTATGCCGGACCTCTTGGTGACCACTCACATAACCTAATAGCATATTTGGAAGCTATCCCAGGAGTTCCCAATATCAAGGATGGTTATAATCCTGCCACATGGATGCTTGATATCAGCTCTACTTCAATGGAGGCTAATCTTGACGTAGATTTTGCAGAGATCTATGCCAAGTCTACCCTTTACCGGAGGAATCAAGAACTAATTGAGGAGCTCAGTACCCCAGTACCAGATTCGAAGGACTTGTATTTCCCAACCAAATATTCCCAATCATTTTTTGTTCAGTGCAAAGCTAACTTTTGGAAGCAATATTGGTCCTACTGGAGATATCCTCAGTATAATGCTGTCCGATTTTTCATAACAATAGTGGTGGGAATAATGTTTGGTGTTATTTTCAGGGATAAAGCCAAAAAAACCCAAAAACAACAAGATTTAATGAATCTTTTGGGAGCCATGTACTCGGCTGTGCTTTTTCTTGGAGTCATGAATGCTTCATCAGTGCAACCAGTTGTTGCCATTGAAAGAACTATCTTCTATCGTGAAAGAGCAGCAGGGATGTACTCTGCATTGCCCTATGCATTTGGCCAGGTGGCAATAGAGGCAATTTACAATGCAATTCAAACAGCAATTTACTCTCTTATCCTTTACTCAATGATTGGGTTTCACTGGAAGGCGACAAACTTCTTTTGGTTTTACTACTATATATTAATGAGCTTTATGTACTTCACATTGTATGGGATGATGATTGTAGCACTAACACCGGGTCACCAAGTTGCTGCCATTTGTATGTCCTTCTTCTTGATTTTCTGGAACTTATTCTCTGGATTTATCATTCCTAGAACGGAATGTGGCTCCTTCTTTTGGCTATCGAAGCTTATGTTTATCCTAAAAATGTTACACAGCAAATTCCTGTGTGGTGGAGATGGTATTATTGGGCTTCTCCTGTTTCGTGGACACTATATGGCCTTATTACCTCACAACTGGGTGACAAAATGCAGAATTGAGATACCAGGTGCTGGAAGCATGGGATTGAAAGAATTCCTTAAACAAAACTTGGGGTTTGAGTATGACTTCCTTCCCGTTGTTGCTGCCGCTCACATAGGCTGGGTTCTCCTTTTCTTGTTTATTTTTGCCTATGCCATCAAATTTTTTAATTTCCAAAGACGA 4338 0.4129 RRSLREAWTAGADVFNVSGRHTHEDDEEQLKWAAIDRLPTFERMRKGVLKHVLDDGHVLLDEIDVTNLASHHKNLLISTILKIVQEDNHQFLRTLRNRVDRVGIEIPKIEVRSENLSVEGDVYVGHRALPSLLNVTLNAFETVLGTFHLAPSKKRKIQILKGVSGIVKPSRMTLLLGPPSSGKTTLLLALAGKLDRDLRVSGRITYCGHELNEFVPQKTCAYISQHDLHYGEMTVRETLDFSGRCLGVGTRYEALVELSRREREAGIKPDPEIDAFMKAIAVSGQKTSLMTDYVLKILGLDICADIMVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPTPETFELFDDIILLSEGQIVYQGPRENVLEFFQHMGFNCPERKGVADFLQEVTSKKDQQQYWSRKDELYRYISVPEFVQAFSSFGIGEHLATELGVPYDKSRTHPAALVRDKYGITNCELFKACFSREWLLMKRSSFVYIFKTSQITIVSIITFTVFLRTKMSVGTVQDGQKFLGALFFSLINVMFNGMAELAMTVFRLPVFYKQRDFRFYPAWAFGLPIWILRIPLSILESGIWIVLTYYTIGFAPSASRQFLVLFCIHQMAISLFRFLAAAGRTLVVANTLGTLSLQLIFVLGGFVIAKDDIEPWMIWGYYLSPMMYGQNAIVMNEFLDKRWSKPNTDTRIHASTVGKVLLKSRGFYTEEYWFWICIGALLGFSLLFNLLFIVALTYFNPFGDSKAVIVDEGGKKNKKSSYMLEGTDKAVKNSSEIDTSSNQEARRGMVLPFQPLSLAFNHVSYYVDMPVEMRSQGINKDRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTNGYIEGSISISGYTKNQTTFARVSGYCEQNDIHSPNVTVYESLLFSAWLRLPSDVTVQTRKMFVEEVMELVELNQIKDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVLCTIHQPSIDILKLLMRYLLLLKRGGQVIYAGPLGDHSHNLIAYLEAIPGVPNIKDGYNPATWMLDISSTSMEANLDVDFAEIYAKSTLYRRNQELIEELSTPVPDSKDLYFPTKYSQSFFVQCKANFWKQYWSYWRYPQYNAVRFFITIVVGIMFGVIFRDKAKKTQKQQDLMNLLGAMYSAVLFLGVMNASSVQPVVAIERTIFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAIYSLILYSMIGFHWKATNFFWFYYYILMSFMYFTLYGMMIVALTPGHQVAAICMSFFLIFWNLFSGFIIPRTECGSFFWLSKLMFILKMLHSKFLCGGDGIIGLLLFRGHYMALLPHNWVTKCRIEIPGAGSMGLKEFLKQNLGFEYDFLPVVAAAHIGWVLLFLFIFAYAIKFFNFQRR 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02247 1446 Pfam ABC-2 type transporter 496 705 IPR013525 GO:0016020|GO:0140359
Pste5g02247 1446 Pfam ABC-2 type transporter 1152 1351 IPR013525 GO:0016020|GO:0140359
Pste5g02247 1446 FunFam ABC transporter G family member 40 839 1070 - -
Pste5g02247 1446 FunFam ABC transporter G family member 34 147 451 - -
Pste5g02247 1446 Gene3D - 145 449 IPR027417 -
Pste5g02247 1446 CDD ABCG_PDR_domain2 822 1061 IPR034003 -
Pste5g02247 1446 SMART AAA_5 169 401 IPR003593 GO:0016887
Pste5g02247 1446 SMART AAA_5 862 1055 IPR003593 GO:0016887
Pste5g02247 1446 CDD ABCG_PDR_domain1 149 399 IPR034001 -
Pste5g02247 1446 Gene3D - 838 1071 IPR027417 -
Pste5g02247 1446 Pfam ABC-transporter N-terminal 86 135 IPR029481 -
Pste5g02247 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 846 1067 IPR027417 -
Pste5g02247 1446 Pfam Plant PDR ABC transporter associated 710 776 IPR013581 -
Pste5g02247 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 825 1079 IPR003439 GO:0005524
Pste5g02247 1446 Pfam ABC-2 type transporter 375 427 IPR043926 GO:0140359
Pste5g02247 1446 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 8 1446 - -
Pste5g02247 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 417 IPR027417 -
Pste5g02247 1446 Pfam ABC transporter 853 1005 IPR003439 GO:0005524
Pste5g02247 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 144 417 IPR003439 GO:0005524
Pste5g02247 1446 Pfam ABC transporter 160 342 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02247 Pste-Chr5 15116257 15123724 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02247 846 1077 Calmodulin-binding Proteins AT2G36910 24.380 7.05e-06 48.9