Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02212 AAAGAGTTGATTTCATTTCAATCTGAATCTGAATATCTCTGGTAGTGTCGTACACCATACACCACACGCATACATTTGTACACAGACATGGGACCATCTCCCTGCGTTTAAATTTTGATCTTTTTCGTGGACGACAGGATCCGAGTCTGCCGCTTAACCCTCTCCATATCATACTTGTTCACCTTTTATCTCACTCACTCTCTCCCTTCCAACCTTGAAACTTTCTCATATGGAAATGGAGGACCATCATCATCATCACCCCCACAACCATCATCACCATCATGAGCAGCAACAGTATGGCATCACTGATCTGAGGCAACTCGTGAACGGGCCGAGGTCCACTCATTTCCCCGCCATGCCGCCGCAGCCCAAGGCGGAGCTGTTTCCCGGCGGGCACCCCAACCTGGCCGCCACACAACACTTGGAGATGATCATGTTTGGTCGTCAAGTAGCCGACATAATGCCTCGTTGTCTACATGACTTTGTCTCCACCGATTCCGCCACCAATAACACCAGCATGGCTGTTGCCACTCCCACCACCACCACCAGTGCCTCCACTCCTCCGCTTAGTTGCTTAGAGGCTGAGACCGCAGGATGCCTCGGTGGAGACGCCTCCACTGGAAGATGGCCCAGACAAGAGACTCTCACTCTTCTTGAGATCAGATCTCGCCTCGACTCTAAATTCAAAGAGGCTAATCAAAAGGGCCCCCTGTGGGATGAAGTTTCTAGGATCATGTCTGAAGAACATGGATATCAGAGGAGTGGGAAGAAGTGCAGGGAGAAGTTTGAGAATCTGTACAAATATTACAAGAAGACAAAGGAGGGAAAGGCAGGAAGACAAGATGGGAAGCATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGTGAAAACAGTAACCAAGCCTCGGTGCCAGAAACCAATTTTGGCAGTGGCAGCCTTCGTTTCCACACAAGCAGCCACAACCCTTCTCAAACAAATCAAGAAATGTTTCAGTCTCAGAAGCATTGTGACAGCCTCAGCCTCACCAACTCCACTGATTTGGACACGTCATCATCGGACGACAATGATCAGAACAGCACTGGGGGGCTCAAGGACAATGACTCCATGGATAAGAGGAGAAAGAGGGTGAGTGGAAGAAGCTGGAAGGTGAAAATAAAGGACTTCATTGACTCACAGATGAGGAAACTGGTGGATAAGCAAGAGGAGTGGTTGGACAAACTCACAAAAACACTAGATCAAAAGGAAAAGGAGAGGGTGCTAAGAGAAGAAGAGTGGAGGAGACAAGAAGCTGCAAGGTTGGAGAGGGAACACAAATTTTGGGCTAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTTTGATGGAGGCTTTACAAAAATTAACAGGAAATGAAATAATAAAGAGTACTCAATCTCCTGAGGGTCTAATGATAACTGGAATTCAAAACCACAGTGAAAACCAGAATGAAGATGGGAGTGAAATACTAAACAGCACTACCAGAGGTGCTGAAAGCTGGCCAGAATCTGAGATTACAAGGCTTCAGCAGTTGAGAACTGAAATGGAGACAAGGTATATGCAAAGTGGGTGTTCAGAAGAGGTTATGTGGGAGGAAATAGCAACCAAAATGGCTTGTTTTGGTTACGAAAGGAGTGCTTTGGTGTTCAAAAAGAAATGGGAAAGTGTCAGCAACTATGCAAGGAATGCCAAGGATGTAAACAAGAAGCGCAAGGAAGAGTCAAGAGGTTGTTTTTACTTCGATAACAGTGACCAGTCTTCTCTGTATAACCAAGGAGGAGGTGCCTATTGTGATATCAATGATCAAAGGCACGACACTGGGAGGCTGCAAACAAATGATGGTTCTTCACCTTCCAATTCAAATGTTGGAAATGCAGTTGCTGGTGATAACTGCTTTCCCTTCTTGATAACTGAGGGTGGAAATTTGTGGGAGAACTATAGCTTAAAGGTTAATAAAACAAGCCAAAACCAGTGAAGAGAGTAAAATAAGGTTGACACTCGAAGAGGCACGAAAATTTCACAGCCTTTTATCTGAGATGATCTCACGTTATGGAAGCAGGAGCTAACTGATGAGGCTCGTTTGTGTATAGAGACTGATGATGATAAGGTGGTCAATCTTGTTATATTTATGTGAAATCAAGGTGGAAAATAATGTGTTCGAGTCACGTAGGTAAGTTTAACGTGGAAGACTAGACATTGGCAAATATCACTGTATGAGTATGACACTAATTCAGGTGAGTTTCTTTGGCAGCAGATTTCTTTTATGGGTGCAAATGGAATTTGCAATTATATTACTTTACATGTTGCATCGTCCAATGATGTTTATATATCATCAATTGGTCAAGGTCTTTCTCCTTCCTCTTTCCGCACCCATCTTGCATTATTATTTTTTTGTAATTTTTGGATATTTATCTGTGCGGGCCTTTTGTGTTTGTGTACTGAATGCTGTAATTAAGGTAGCAATTTCTTTGGTTTTATTTTTTTGTCAATATTATGAACGGGGAGAAAGTGATGTATTGATGGATAATTGGATATTGTTTTTAATTAAGCATCTGTATTGCTGA 2585 0.4356 MEMEDHHHHHPHNHHHHHEQQQYGITDLRQLVNGPRSTHFPAMPPQPKAELFPGGHPNLAATQHLEMIMFGRQVADIMPRCLHDFVSTDSATNNTSMAVATPTTTTSASTPPLSCLEAETAGCLGGDASTGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNQASVPETNFGSGSLRFHTSSHNPSQTNQEMFQSQKHCDSLSLTNSTDLDTSSSDDNDQNSTGGLKDNDSMDKRRKRVSGRSWKVKIKDFIDSQMRKLVDKQEEWLDKLTKTLDQKEKERVLREEEWRRQEAARLEREHKFWAKERAWIEARDAALMEALQKLTGNEIIKSTQSPEGLMITGIQNHSENQNEDGSEILNSTTRGAESWPESEITRLQQLRTEMETRYMQSGCSEEVMWEEIATKMACFGYERSALVFKKKWESVSNYARNAKDVNKKRKEESRGCFYFDNSDQSSLYNQGGGAYCDINDQRHDTGRLQTNDGSSPSNSNVGNAVAGDNCFPFLITEGGNLWENYSLKVNKTSQNQ 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02212 588 ProSiteProfiles Myb-like domain profile. 125 190 IPR001005 -
Pste5g02212 588 MobiDBLite consensus disorder prediction 223 289 - -
Pste5g02212 588 FunFam trihelix transcription factor PTL-like 133 195 - -
Pste5g02212 588 MobiDBLite consensus disorder prediction 532 553 - -
Pste5g02212 588 Gene3D - 133 195 - -
Pste5g02212 588 Gene3D - 431 493 - -
Pste5g02212 588 Pfam Myb/SANT-like DNA-binding domain 430 515 IPR044822 -
Pste5g02212 588 Pfam Myb/SANT-like DNA-binding domain 132 218 IPR044822 -
Pste5g02212 588 CDD GT1 132 197 - -
Pste5g02212 588 Coils Coil 322 349 - -
Pste5g02212 588 CDD GT1 431 495 - -
Pste5g02212 588 MobiDBLite consensus disorder prediction 410 434 - -
Pste5g02212 588 MobiDBLite consensus disorder prediction 1 23 - -
Pste5g02212 588 PANTHER FI21293P1 97 538 - -
Pste5g02212 588 MobiDBLite consensus disorder prediction 223 301 - -
Pste5g02212 588 FunFam Trihelix transcription factor GT-2 431 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02212 Pste-Chr5 14655564 14658965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02212 22 583 Trihelix Transcription Factor Family AT5G03680 46.000 1.65e-143 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste5g02212 Myb_DNA-bind_4 4.4e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02212 5 14655564 14658965 Pste5g02212 5 14655564 14658965 ECH
Pste5g02212 5 14655564 14658965 Pste4g02355 4 16808066 16811036 PCT