Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02202 ATGAACATGTTATCAACGGCAACAGCAAAAGGTGATTCCTGGCCGTACAATTCCACGGTAGCGACGATGGTGGGGCGGCGGCGGATTCCGATACAGAGGACGTTCTACTGGGGGCACAAGGTGGACATACTTTTCGGGTGTTGGCCAGGTGACAGCGCTTCGATGTACGCGGTGGCGCTGGTGCTGGTGTTCTTGATGGCGGTGCTGGTGGAGTGGCTATCGTTCACTAATATAGTGAAGCTGAAGCCTGGGGGCTCAAACGACGTCGTTGGGGGGCTACTCAAGACGGGGCTATACGGCGTGCGTTCGGGGCTCTCTTACATGGTCATGCTGGCCGTCATGTCGTTTAATGGTGGCGTGTTCGTCGTAGCAATTTGTGGCCACGTCATCGGCTTCTTCATTTTCGGCACGCGGGCTATAATGAAGAATGCCGCTGGGTTGGACTCTTCCAAACCGGAAACACCTCATTGGCTTTATAAGATGTTCTTTAAAATTGATGAGCTAGATCTTTCTCACAACAAAATAAGTGGCTATATTTCCAAACTGTGGAACTTTTCTGACTCGGGTGTTGCTGTCTGGGTTGACCTTGCTTTCAATCAGTTGAAGGGCCCAATTCCACTTCGGCCCAGTGTCGTCGCTCTCGATCTAAGCTATAACTTGTTGACCGGAACAATGCTAGCCAATGTTGGTGAAAAAATATTAGATGTGGTTTTCTTGGATCCCTCAAATAACCACCTGAATCGGAGCATTCCACTGTCAATTAATAAGTTTTATGATTTGGAATATCTTGATTTATCTAATAATGATTTGACAGGACCTATCCCTGAGTTTGGGGTGAGTATGAAAGGATTAAAAATTGTTGATCTATCCAACAATAGTTTGTCAGATATAGCAGAAAACAAACTATCGGGATCTATACCAGCATGTTTGGGTGATATGCACAGTTTCAATCAGCCTCAAACTTACTTCCTTAGTTTGGCTTTTAATTATGGCAGTGAATCGTATAGGAGGCATATGGAGTTGATCCTGAAAGGAAGAACAACTAAATACATAGACGGAATGGCTGTGCTTTCAACCATTGATCTTTCTAATGATGATCTCTATGGAAAGATATCAGAGAAGGTCAATCCCTCCAAGCATGGTTGCCATGACTTTCTTGAGCTATTTGAACTTGTCCCACTCTCTAGACAAATTCCGGTTGCTAATCAGTTTGGAACCTTCAATGATCCATCGATTTATATAGGCGACCCTCTACTGTGTGGAAATCCGTCGCCAACTAATTGCTCATCATTGTTTCATAGAAAAGGAGAGAAAGAAAGAAAACAAGAAGATGATGACAAGAGTGAGAGGTTGTGGTTATTTGGAAGCGTAGCTCTTGGGTACATCACAGGCTTCTGGTTAATCTGTAGGAGCTTGGCGTTGAACAAGTCCTGGAGAGATAGATGCATATTTCAAGTTTGTGTTTGA 1467 0.4451 MNMLSTATAKGDSWPYNSTVATMVGRRRIPIQRTFYWGHKVDILFGCWPGDSASMYAVALVLVFLMAVLVEWLSFTNIVKLKPGGSNDVVGGLLKTGLYGVRSGLSYMVMLAVMSFNGGVFVVAICGHVIGFFIFGTRAIMKNAAGLDSSKPETPHWLYKMFFKIDELDLSHNKISGYISKLWNFSDSGVAVWVDLAFNQLKGPIPLRPSVVALDLSYNLLTGTMLANVGEKILDVVFLDPSNNHLNRSIPLSINKFYDLEYLDLSNNDLTGPIPEFGVSMKGLKIVDLSNNSLSDIAENKLSGSIPACLGDMHSFNQPQTYFLSLAFNYGSESYRRHMELILKGRTTKYIDGMAVLSTIDLSNDDLYGKISEKVNPSKHGCHDFLELFELVPLSRQIPVANQFGTFNDPSIYIGDPLLCGNPSPTNCSSLFHRKGEKERKQEDDDKSERLWLFGSVALGYITGFWLICRSLALNKSWRDRCIFQVCV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02202 488 PRINTS Leucine-rich repeat signature 281 294 - -
Pste5g02202 488 PRINTS Leucine-rich repeat signature 260 273 - -
Pste5g02202 488 Pfam Leucine Rich Repeat 260 275 IPR001611 GO:0005515
Pste5g02202 488 SUPERFAMILY L domain-like 159 367 - -
Pste5g02202 488 PANTHER LRR RECEPTOR-LIKE KINASE 153 296 - -
Pste5g02202 488 Pfam Ctr copper transporter family 93 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pste5g02202 488 Gene3D Ribonuclease Inhibitor 146 435 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02202 Pste-Chr5 14566721 14571403 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02202 34 138 Inorganic Solute Cotransporters AT5G59030 49.524 9.49e-33 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02202 5 14566721 14571403 Pste5g02202 5 14566721 14571403 ECH