Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02193 GGATCCCTAAATAAATTCATTCGATGAACACTCGGAACTGTTCGTTTTTTCTGGAAACATTTCCTCTTCGCTCTCTCTCTTTGCATCCATGGAGTTTTGGGGTGTTGAGGTGAAAAGTGGAGAATCTCTCAAGGTTGATCCAGGAGATGACAAGATTATCCACCTTTCAAATGCATGCCTGGGGGATGTCACTAAGGATAAAGGACCAGTAGCCTTGTACGTGAAGTTTGGTAACCAGAAGCTTGTACTTGGAACACTTTCCCCTGATAAATTTCCTCAGATATCTTATGATTTGATATTTGAGAAGGAATTTGAGCTATCTCATAACTGGAAAAATGGGAATGTCTTCTTTACTGGATTTAAAGCTCAATCTCAGTTGGAGTCTGATAATGATGAAGATTCTGATGATTTTGATGAAGATATTCCAGTTAGTGCTGTCAATGGTAAATATGTTTATTTTATGGAGACTTGATATTGAGGTGAAGAATGGTGTAAAATCTGATACAAATGAAGCTAAAAAGGAGAAGATAGTAGATCCAAGGAAGAATGAGAAGGCAAAGGCAAAGGATACAACTGGTGAAGATGAAGATTCATCCGAATCTGATTCTGATGATGATTCAAGTGAAGATAAGCTCACAGTGAATGGTGACATGGAAAGTAGTGAAGGTGATGATGATAGCGATGAGGATGATGACGATGAATCCGATGAGGAGGAGACACCGAAGAAGATTGAGGCAAGCAATAAGAGGATTATTGATTCTTCTAAGAAAACACCTGTTCCTGTGAAAAAGGCAAAATTTGTTACTCCTCAAAAGACTGATAGCAAGAATGTTGTCCATGTGGCAACTCCTCACCCTTCTAAGCAGGCTGGTAAAGTAACTGCAAATAACAAGCAGCAGACTCCAAAATCTGGTGGAGATTACAGCTGCAAGCCTTGCAACAGGTCATTTAAGACAGAAGATGCCATAAATGCTCATAATAAGGCCAAGCACAGTGCTAAGTAAAGGTTTGCTTTTTGCCCAAGCAGTGAGTATGTTGATGTTTCTGGTTTTGGATGATAGTAAGAAAACAATTTAGTGAATGTAGGAAAGCTGGTCTCGTGATTTTCGTATTCAACTTGGATTTAAGGGTTGATATTCGCTCTTATTTTGTGGGTTTAGGTAACTGACTTTGCGCCTACTTTATCGGCCTGCTTTCAACCGAGTCCTTGCCATATTTATGTTTGTGATAGCATTCGTGAATACCCCTGCGACTCATGAAATAAGTTTTTCTCCTGACAAAGGGAATTGGGAGTTAATGTTGCTTAACCATCGACTATGATTGCTTATAATAATCGTTATAAACTAT 1347 0.3898 MGMSSLLDLKLNLSWSLIMMKILMILMKIFQLVLSMVNMFILWRLDIEVKNGVKSDTNEAKKEKIVDPRKNEKAKAKDTTGEDEDSSESDSDDDSSEDKLTVNGDMESSEGDDDSDEDDDDESDEEETPKKIEASNKRIIDSSKKTPVPVKKAKFVTPQKTDSKNVVHVATPHPSKQAGKVTANNKQQTPKSGGDYSCKPCNRSFKTEDAINAHNKAKHSAK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02193 222 MobiDBLite consensus disorder prediction 128 148 - -
Pste5g02193 222 MobiDBLite consensus disorder prediction 107 127 - -
Pste5g02193 222 MobiDBLite consensus disorder prediction 177 195 - -
Pste5g02193 222 MobiDBLite consensus disorder prediction 56 82 - -
Pste5g02193 222 MobiDBLite consensus disorder prediction 56 151 - -
Pste5g02193 222 MobiDBLite consensus disorder prediction 171 222 - -
Pste5g02193 222 ProSitePatterns Zinc finger C2H2 type domain signature. 198 219 IPR013087 -
Pste5g02193 222 ProSiteProfiles Zinc finger C2H2 type domain profile. 196 222 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02193 143 221 C2H2 Transcription Factor Family AT5G03740 58.621 7.07e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste5g02193 None None None