Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02171 CCCCAGTCCTAATTACCTTTTCCTCAATCACACACTCTCTCCAATCATGCCACGTTTTCTCTAAATCCCAAGTACCTTTCTTCTCTTTTAAATTAAAATTATAAAACACCACCATTAGTGTTGTGTTTGTGTTCCCTCTCTACCCTCTGGTCTCTAGTCCCTAGTCCCTTCACCAGACCATAACATGAACCTGCAACTGCCACTGGTCGTGGCCTTGAGCTTTGCCGTCTCCATCCTGTGCGTATCAGGGCAGAATGATACACTCGCCCTCACCGAATTCCGCCTCCAAACAGACACCCACGGCAACCTCCTCACAAACTGGACCGGCGGCGACGCCTGCTCCGCGGCATGGCGCGGCGTCGAGTGCTCCCAGAACGGCAGAGTGGTGGGTCTCTCCCTTCCTTCCCTAAACCTGCGGGGCCCAATTGAGTCTCTCTCCACGGTCGTCTACCTTCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGCAGCATTTCGCCCCTCTTAAACTGCACCAGCCTGGAACTACTCTACCTCTCCCGCAACGACTTCTCCGGGGAGATTCCGCCGGCGATATCCTCCCTCCGCCTTCTTCTCCGCCTGGACATCTCCGACAATAACATCCGCGGGCCAATCCCCACCCAACTGGCGAAACTAACCCACCTCCTCACGCTACGGTTACAGAACAACGCCCTCTCCGGCCACGTCCCCGACCTTCCCGCTTCACTCCTCAACCTCACCGAACTCAACGTCACCAACAACGAACTCGGCGGCCACGTTCCCGATTCCATGCTCACCAAATTCGGCAACACCAGCTTCTCCGGCAACCACGCTCTCTGCGCCTCCACAGCCACAGCCATAGCCACAGCGTTGCCCATATGTTCCCAAACAGAACCTGCAGACACCGAGACTACAATCAGTGTTCCTGCGAAACCCAGCTCTTTCCCGCAAACAAGCACTGTCACAGTTGGCGAGACTCGGAAAAACAAAGGAATGAGCGCCGGTGTCATTGTGGCCATTGTGGTGGCGGTTTGCGTGGCGGTGCTGGTGGGGATGTCATTCGTGGTGGCGCATTGTTGCGCCAGGGGAGGGGGAAGCTCTGGGTCTGTGGTGGGGAGCGAGGGTGGGAAGAGGAAGAGTGGGAGTAGCAGTGGGAGCGAGAAGAAGGTGTATGGGAATGGTGCAAGTGTGGATAGAGATAGTGATGGGACGAATACCGAAACGGAACGGAGCAAGCTTGTGTTTTTCGATAGGAGGAAGCAGTTTGAGTTGGAGGATCTGCTTCGAGCTTCGGCGGAGATGCTTGGGAAAGGAAGCTTGGGAACGGTTTACAGAGCAATGCTGGACGATGGGTGCACCGTGGCTGTGAAGAGACTCAAGGACGCTAACCCCTGCGAGAGGAACGAGTTTGAACAGTATATGGATGTTGTAGGGAAGCTGAAGCACCCAAACATTGTCAGACTCAGAGCTTATTATTACGCAAAGGAAGAAAAGCTTCTGGTGTATGATTATGTACCCAATGGAAGCTTGCATGGTCTACTTCATGGGAACCGTGGTCAGGGAAGAATTCCGGTGGATTGGAAGACAAGAATAAGCATGGTGTTAGGTGCGGCAAGAGGGCTGGGGAGGATCCATGCAGAGTACAAAGAGTCAAAGATACCACACGGGAACGTGAAATCGTCGAACGTGATTCAGGACAAGAACGGGGAGGGTTTAATATCGGACTTCGGGTTGTCGCTGCTGTTGAAGCCGGTGGATGCGATAGGGAGGTTGGGGGGGTACAGAGCGCCGGAACAAGAAGAGGTGAAGAGGCTGTCGCAGGAGGCAGACGTGTACGGGTTCGGAGTGTTAGTGTTGGAAGTTCTTACAGGGAGGGCTCCAAAGACGCAGCGTGGGCGACTGGAGGAGGAAGCAGAGGTGGATCTTCCAAAGTGGGTAAAGTCAGTGGTGAAGGAGAAGGAGGAGTGGACCTCAGAGGTGTTCGACCAGGAACTGTTGAGGTACAAGAACATTGAGGATGAGATGGTGGCCATGCTTCACGTGGGGCTGGCATGCGTGGTGCCGCAACCTGAGAAGAGGCCAAGTATGTTGGATGTTGTTAAGATGATTGAGGATATCAGCCTCCAACACTCTCCTCTTCCAGAGTATTACGATCACCATCGCTCTCGCACTTCCCTTCCCACCACTGAAGACAACCTCCCTTAATACTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTTCCCTTCTCATTACCTCTTTAAATTAATTCTCTACTTTTCTTTCTCAAATATTAATTGCTCTTCAATCTTAAATCCACCCCGCTCATTTCTGTAACAAAAATGTCTTCTAAAATTACTAAAATTACATAGGCAAGTAAAGGGGGAGAAACTCCCAGGCATTACTTTAGCTACATGCATCTTATTAACAAAGACTCGGATTACTAACTTGATAAAATATTTTAAAAGGAAAATTTACCAAAATGTCTATTTTTAATGTGTTTGTTTAAATTGTCTTTATTAAAAAAAAATTTGTTTAGTTAAAATGAAGACACCTACAATAGGAAAATATTATTAGATGCTATTGGATTACTATGTCTTAGGTGGATTTTTCTAACCCTGTATACATATTTGCTATGTTTAAAAATCAAACAAAACACACTGATTTAATCGAAAAACCGATGCATCACTCTAATAACCGATTCATTTAGTGCAAAGAACCAAGTCTTAAATCCGGTGAAAATTAATGATTCAACCAATTTTTAATTTTTTTAAGATTTTTTGGATTTTTCTAAATGCATC 2799 0.487 MNLQLPLVVALSFAVSILCVSGQNDTLALTEFRLQTDTHGNLLTNWTGGDACSAAWRGVECSQNGRVVGLSLPSLNLRGPIESLSTVVYLRFLDLHENRLNGSISPLLNCTSLELLYLSRNDFSGEIPPAISSLRLLLRLDISDNNIRGPIPTQLAKLTHLLTLRLQNNALSGHVPDLPASLLNLTELNVTNNELGGHVPDSMLTKFGNTSFSGNHALCASTATAIATALPICSQTEPADTETTISVPAKPSSFPQTSTVTVGETRKNKGMSAGVIVAIVVAVCVAVLVGMSFVVAHCCARGGGSSGSVVGSEGGKRKSGSSSGSEKKVYGNGASVDRDSDGTNTETERSKLVFFDRRKQFELEDLLRASAEMLGKGSLGTVYRAMLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYVPNGSLHGLLHGNRGQGRIPVDWKTRISMVLGAARGLGRIHAEYKESKIPHGNVKSSNVIQDKNGEGLISDFGLSLLLKPVDAIGRLGGYRAPEQEEVKRLSQEADVYGFGVLVLEVLTGRAPKTQRGRLEEEAEVDLPKWVKSVVKEKEEWTSEVFDQELLRYKNIEDEMVAMLHVGLACVVPQPEKRPSMLDVVKMIEDISLQHSPLPEYYDHHRSRTSLPTTEDNLP 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02171 673 MobiDBLite consensus disorder prediction 315 329 - -
Pste5g02171 673 SUPERFAMILY Protein kinase-like (PK-like) 372 642 IPR011009 -
Pste5g02171 673 MobiDBLite consensus disorder prediction 653 673 - -
Pste5g02171 673 Gene3D Ribonuclease Inhibitor 137 218 IPR032675 -
Pste5g02171 673 Gene3D Ribonuclease Inhibitor 24 136 IPR032675 -
Pste5g02171 673 MobiDBLite consensus disorder prediction 304 344 - -
Pste5g02171 673 SUPERFAMILY L domain-like 23 204 - -
Pste5g02171 673 Gene3D Phosphorylase Kinase; domain 1 335 443 - -
Pste5g02171 673 Gene3D Transferase(Phosphotransferase) domain 1 444 658 - -
Pste5g02171 673 ProSiteProfiles Protein kinase domain profile. 368 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02171 673 FunFam pollen receptor-like kinase 1 338 443 - -
Pste5g02171 673 FunFam Nuclear pore complex protein NUP107 22 177 - -
Pste5g02171 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 646 IPR046959 -
Pste5g02171 673 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Pste5g02171 673 ProSiteProfiles Leucine-rich repeat profile. 89 111 IPR001611 GO:0005515
Pste5g02171 673 Pfam Protein kinase domain 372 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02171 673 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02171 Pste-Chr5 14268635 14271540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02171 22 669 Receptor kinase-like Gene Family AT2G36570 60.207 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste5g02171 Pkinase 9.2e-31 CL0016