Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02159 GCAACATTCAGTCAGTGTATGGGAGCGCCTCTGCGTCGCAACGCAGACTAACGAAGAATCCGAAATGACGCAAATCCGTGACTAGAAAGCTTCCAGATTCGTCAACTGCGAGGGAAGAGTCATATTTTGCGATAACCCTATACCCAATTTGGAGCTTTGAGAGTTTGGAGAAGAAGTTTGATTGAAACATGCTTCAGATTCGGCTTAGTAAGACTCCTACATCAGAAGGGTCAGCAGGGGTGAAGCTGCCCCCGGTTGAGACAGTTACAGTTGCGTGCCCTGATCATCTGGTCCTTGCTGATCTTCCTGTTGCGAAGGGCATTGGTGCGGCCACTGCTGCTTCCCTTGTTAAGACTTTGGGTCGGAGGTCCCGCCGCCAGCTTGGGGAGCGAGTTCATTTCTGTGTTCGCTGTGATTTTCCTATCGCCATTTATGGACGACTGAGCCCTTGTGAGCATGCCTTTTGTTTGGATTGTGCTAGAAGTGATTCAATGTGCTACCTGTGTGATGATCGAATCCAGAAGATTCAGACAATCAAAATGATGGAAGGAATCCTCATTTGTGCCGCTCCTCATTGTCTCAAGTCTTTCTTGAAGAAAACTGACTTTGAATCTCATATCCAAGACAGCCATTCCAACCTTCTACGACCAAATGCAGATAAAGAAGATGGAAATGAGTCGGAGGCACAGAGTGTTAGGCAATCTACAGCTTCAGATTCCACTGCTCGAGGTCCCCAAAGACCAGTTTTTTCTCCTGGTTCAAATTCCCAGCAACATGATCTGGAAGATAAATCCCGTAGACAGCCACCTAGAGAGCAACCACATTCAAGACAAACTCTGCAGCCAAAGCCACCATATTATGGTCAACAACTCCCTTCGGATACCATGTCTGGCTCTGTCGGAGGTGGACAACAGGGGTTTCATCAACAAAATTTTGACATGCAGCATCCCCCCCAAGAACCTTCCCAGTTTGCTGACAGGCAACAAGCAGTTGGTCCAGAGACTCCATTTCCTGAGTATCCAACAATGCACCCTGCTCAACCTTCCAATGTTCCCTCACTGGTTACTTCAAACCCAATGCTGAACCCTCCTATGCCTTTTGGTTACCCCCCTTACCCAAACGAACGAGCTCAACCATTTTATGCTGCTCCCTATGATATTCCTAGGCAGGACTCGGGTGCTGATATAGGTGGAGACCAGAGTTCATTACTGGGTTTTCCACAAGGTGGTCCAAATTTTCCAGGAAATTATCCCCAGCCCTGGAATTCAGGAATTGGTGGTGTGCCTTTTGAACAAGCACAGAGTGGTATGGTTGTGGATCCAAGGGATGCCAAAGGTATATTGGCATCACAGCCCATGCCCCTCCCGCCACCACCCCCACCACCCCCCCACATGTCACATTTGAAACAGAACTACTATTCTGGGGAGCTTGGACATGATGGGCAGGGTTATGGGTGGCAGCATGATAACCGTGATAGCTTTGGTAGTCAAGGCTAGTGAGGCTTCCAATCTTTACTTGTATTAGGTTTGGTTGCTTTTGAGATGTTTCTGCAGCATATTTGTCTCATGCATCATTTGAATTGCCAAATAGCGATTAAACTATTTACTTTTTGGCCTATTTTGTATATTTTAACTGAATTGAGTTTTTCCATTATATAATTTACCAAAGGTAATTAAAAGTTTT 1683 0.4635 MLQIRLSKTPTSEGSAGVKLPPVETVTVACPDHLVLADLPVAKGIGAATAASLVKTLGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSMCYLCDDRIQKIQTIKMMEGILICAAPHCLKSFLKKTDFESHIQDSHSNLLRPNADKEDGNESEAQSVRQSTASDSTARGPQRPVFSPGSNSQQHDLEDKSRRQPPREQPHSRQTLQPKPPYYGQQLPSDTMSGSVGGGQQGFHQQNFDMQHPPQEPSQFADRQQAVGPETPFPEYPTMHPAQPSNVPSLVTSNPMLNPPMPFGYPPYPNERAQPFYAAPYDIPRQDSGADIGGDQSSLLGFPQGGPNFPGNYPQPWNSGIGGVPFEQAQSGMVVDPRDAKGILASQPMPLPPPPPPPPHMSHLKQNYYSGELGHDGQGYGWQHDNRDSFGSQG 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02159 435 MobiDBLite consensus disorder prediction 146 165 - -
Pste5g02159 435 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Pste5g02159 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 120 IPR013083 -
Pste5g02159 435 MobiDBLite consensus disorder prediction 384 435 - -
Pste5g02159 435 MobiDBLite consensus disorder prediction 166 195 - -
Pste5g02159 435 FunFam E3 ubiquitin-protein ligase Hakai 69 123 - -
Pste5g02159 435 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 425 IPR040383 GO:0016567|GO:0061630
Pste5g02159 435 MobiDBLite consensus disorder prediction 211 266 - -
Pste5g02159 435 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Pste5g02159 435 MobiDBLite consensus disorder prediction 196 210 - -
Pste5g02159 435 CDD RING-HC_HAKAI-like 70 119 IPR040380 -
Pste5g02159 435 MobiDBLite consensus disorder prediction 146 274 - -
Pste5g02159 435 MobiDBLite consensus disorder prediction 388 403 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02159 1 434 C2H2 Transcription Factor Family AT5G01160 45.740 9.79e-112 331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02159 5 14201122 14205654 Pste5g02159 5 14201122 14205654 ECH