Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02140 CAAACATCCTCTGCACCAATCACAACTCAACCCCTTTGACTATCTCTCTCCATAGATCGCTGTCTTTAAATCACTTCAAACACAGCTGACACATTTCTCTCTTTCACTCATTGTACCTCCCTCTGCACTGCACACAACTCACAGCCACTTCTATTCTTCTTAAATTCTTTTCAGCTTTTTGCTTTTTTTCTATTGCCCCCTCTCACTGTTTTCGGTTCTATCATAGATTCTAGTACCAATAGTCCAATACTTAATAGATACATGTATCTTCTATGCTGTTTGGAACTCTCCCAATTATTGAGTGTCACTCTACAAACTTATAGGTTTGATTTCGGAACCTCATCAATTTAGCCTTTTCTTTTCTCTTTTGGTTTTTATGGTGAGTCTTTCTTTTCTTCTTCTCTTAGATCTGAAGAGTTTCTTAAGGGTTTAAAATTTTCCCATTATTGATTCTCTTAAAGTTTTGGAATTTTCCTTGAGGTTTAGAAAGAAAGCCTATTCTAGATTCTTTTGTTCACAAGAAGCTCCTACCCTCTGCATTCCTCTTTGGAGTATCTCTCTCTGAACTTTTCTTAGACAGAGAGAGTTGAATTCTAAAATATTGTTTTGACACACTTGCTTATTGCTATGAGATCAATGAATAGAGGAATTGAAGTACTGTCTCCAGCCTCCTATCTCCAAAACTCCAATTGGTTGTTCCAGGAAAGCAAAGGAACAAGATGGACTCCAGAAGAGAACAAGCTGTTTGAGAATGCTTTAGCTTACTATGATAAGGACACCCCAGATAGATGGATGAGGGTTGCAGCCATGATTCCTGGGAAAACTGTTGGTGATGTGATCAAACAGTACAGAGAGCTTGAGGAAGATGTTAGTGTCATTGAAGCAGGTTTGATCCCAGTTCCTGGCTATACTACCAGTTCTTTCACATTGGAGTGGGTTAACAATCAAAGCTATGATGAGTTCAAGCAGCTTTGTAGTGTTGGTGGGAAAAGGGGTGCATCCACTAGGCCATGTGAGCACGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAGGAGCACAGGCAATTTCTGCTGGGTCTCAAGAAGTATGGTAAAGGGGATTGGAGAAACATCTCTAGGAACTTTGTGACCACAAGGACGCCAACTCAGGTTGCAAGTCATGCTCAGAAGTACTTCATCAGGCAGCTTTCAGGAGGGAAGGATAAGAGGAGATCCAGCATCCATGACATCACAATGGTCAATCTCCAAGAAACAAAATCTCCTTCATCAGAAACTACCAAGCCTTCTTCCCCTCTGCAGAATCAGAAATTGTCTAGCATGGTTAAGCATGAATATGACTGGAAATTGCCATGTGAAAGCATGCCATTTGTTTTCAATTCCACAAATGGAAACACGTTCATGGCAACACAACTCCATGGGATTTCTTCATATGAATCTAGACCACCAGAGCATAATTTACTTAGACAATCTCCATGGATGCCAGTTTTCACATTGTGATGCTATTTTGCAAATGCAATTAATGCGACATCAATGATCTATGCATGTGATGCAGGGTTTATAGTTTTGAAGGTACAACAGAACTTGTAAACCTTTCCTCAGTGATGTTGAATTGCTTCATAGATGATTTGTGTGAATATGTAGAGGAGGACTGGGTTAGTCCTTACTCCTTAGTAATTAGAATCTATATAGAGATTAGTTCGAATTTTGATCTGATATTAAAATTCTGGGACTAGTCTATCAGAGAAGTTAAGTTTGGGGATGTGTAATAACTTCGTCTGATTTGAGTGAGCTTGCATCTGATGTTCATCTTCCATCATAGTCAGGAATAATCTACAGATTACCCTGAGGAAGGAGAGTTATATCTCAACTTTTAATAAGATGCTTCAAATAAATATGCAGTTCCAAGTTTACATAAAGAATTAAATAAAGGGCATCCATCACTTTGATGTACTAGTGGTGTAATATAAAGCAATTTGGACTGTTATTTTTTATTATCCTATGTTAGGAGTATACTTAAAGCCATAATGTATGATTAAACCAAAAAGCTTTTCTCAAATGTGATGTGGACTTGA 2072 0.3847 MRSMNRGIEVLSPASYLQNSNWLFQESKGTRWTPEENKLFENALAYYDKDTPDRWMRVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLIPVPGYTTSSFTLEWVNNQSYDEFKQLCSVGGKRGASTRPCEHERKKGVPWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLSGGKDKRRSSIHDITMVNLQETKSPSSETTKPSSPLQNQKLSSMVKHEYDWKLPCESMPFVFNSTNGNTFMATQLHGISSYESRPPEHNLLRQSPWMPVFTL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02140 289 Gene3D - 137 187 - -
Pste5g02140 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 187 IPR017930 -
Pste5g02140 289 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 26 264 IPR043363 -
Pste5g02140 289 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
Pste5g02140 289 Pfam Myb-like DNA-binding domain 31 76 IPR001005 -
Pste5g02140 289 FunFam transcription factor MYB1R1 137 188 - -
Pste5g02140 289 NCBIfam myb-like DNA-binding domain, SHAQKYF class 134 186 IPR006447 GO:0003677
Pste5g02140 289 Gene3D - 24 91 - -
Pste5g02140 289 CDD SANT 138 183 IPR001005 -
Pste5g02140 289 SUPERFAMILY Homeodomain-like 133 186 IPR009057 -
Pste5g02140 289 ProSiteProfiles Myb-like domain profile. 24 78 IPR001005 -
Pste5g02140 289 SMART sant 135 185 IPR001005 -
Pste5g02140 289 SMART sant 28 80 IPR001005 -
Pste5g02140 289 ProSiteProfiles SANT domain profile. 139 187 IPR017884 -
Pste5g02140 289 FunFam Transcription factor SRM1 24 91 - -
Pste5g02140 289 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Pste5g02140 289 MobiDBLite consensus disorder prediction 207 228 - -
Pste5g02140 289 CDD SANT 31 77 IPR001005 -
Pste5g02140 289 SUPERFAMILY Homeodomain-like 30 85 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02140 Pste-Chr5 13963038 13965618 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste5g02140 Myb_DNA-binding 3.7e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02140 5 13963038 13965618 Pste5g02140 5 13963038 13965618 ECH
Pste5g02140 5 13963038 13965618 Pste8g01282 8 6824450 6826766 ECH
Pste8g01282 8 6824450 6826766 Pste5g02140 5 13963038 13965618 ECH