Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02139 GAGACGCAAAGAAGATCCAAAGTAGCGTAAGCGCCAAACGCATCTCTAAACATCCAACGTCTCTGGTCTTCTCTCGCTCATCGTTTCCATCTCAACCCTCCAATTTTGTTCTTAATTATACTCTCTTGCATTGTTGTGTAGTTGAATTCTAAGTCGAAGGCCGTTTATTTTCTTTGCTCTCTCCCTCGCCATTTTCATCTGCAGTAGGGGCATCATCTTCTTCTTTTGAACGAGTGAATAAATTGAACCCGGTCACCATTCTTCCTCGCCCACATTATTAATATTAATTATCACCCTCCAAAAGCCAAGCTAACCGACAATGAATGTCCATTTTTGGAACAATGGGATTTGAGCAGGATACAGTTCTGGTACCACCATGGCTCGAACAACTTCTTCACACACCCTTCTTCAGCGTGTGTCGGATTCACGCAGACGCCGCCAGAAGCGAATGTAACATGTATTGCCTAGATTGCCACGGCGATGCCTTTTGCTTTTATTGTCGTTCTTCCAGACACAAAGATCATCAAGTCATTCAGATAAGGCGATCTTCGTATCACGATGTAGTGAGGGTGGCAGAAATTCAGAAGGTGTTGAACATAAGTGGAGTGCAGACATATGTAATCAACAGTGCTCGAGTTTTGTTTCTGAATGTGAGGCCTCAGCCAAAATCTGGAAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGCCTCTTGGACCCATTTAGGTTTTGTTCTTTGGGATGCAAGCTTGAAGGAATAAAGAAAAATGGGGATGCAAGCTTTGCTTTGGATGGTAGGAATGAAGAATTGACAATGGATAATTCAAGGGGATCGGTCTCGTCAAGACAGCAAGAAGAAGGATTGCGTGAAGGTTCAACACAAGACATGTATCCAGCCACGCCTCCTCCACCTGCTTCAAATGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGCCTCCTAAATGGTTATTCCTTCTACCCTTAAAGTTGGTACATATTCAATATTCAACATCATCGGCAAATTTTTTTTTTTTTTACTTGTAATATACAACAACCCTCCTTAGTGGGAAGCCCGGCCTCGTGATTATAAATTTTTTTAATAAAATAATGAAAAAGAAAATAGGAGCCTTTAGAGGGGGTTTTGTCCAAGCCATGGTCCGTGATGTGGGAAAAGAAAGGGTATATAGGAAAGTTCCCACTTTTCGGGTCTAGGTCCCAAAAAACAAATTCCCCCTTGTGAAGATTCAATAATGCACATTTGTTTAATAGTTAATTTCTGTGGGTGTATACGTAA 1306 0.4181 MSIFGTMGFEQDTVLVPPWLEQLLHTPFFSVCRIHADAARSECNMYCLDCHGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLNISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLEGIKKNGDASFALDGRNEELTMDNSRGSVSSRQQEEGLREGSTQDMYPATPPPPASNARRRKGIPHRAPFAS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02139 216 Pfam PLATZ transcription factor 73 144 IPR006734 -
Pste5g02139 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 214 - -
Pste5g02139 216 MobiDBLite consensus disorder prediction 162 216 - -
Pste5g02139 216 MobiDBLite consensus disorder prediction 166 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02139 Pste-Chr5 13957555 13959657 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pste5g02139 PLATZ 2.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02139 5 13957555 13959657 Pste5g02139 5 13957555 13959657 ECH
Pste5g02139 5 13957555 13959657 Pste4g02243 4 16212696 16214060 PCT