Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02136 AATTCACCCATGCCAGCCATGCTATTCATATTTCCACATCTTCAGTCTATGAAGTTTCAGTCATTATGGTTACTTGTACTTGTAATGTGGTTTTATGCATTCAAAATGACCACTTCTTCTTTGACAACCTCATCCATATTGCAACGGAAAGAAGCAAATGTTTTGTTGAAGTGGAAAGCTAGCCTTGACAACCAAAGTCGGGCTTTGTTATCTTCTTGGGCTAGCAATAGTCCTTACATTTGGTTTGGAATTACCTATGACCACTCCAATTCTGTCTCTAACATAACTCTTAGAGATATTGGATTAAGTGGTATGCTCTGCACTCCCAATTTTTCATCACTTCCAAACATCCTCACTTTAAATATGAGCAATAACACCTTGATTGGAAAAATATGTCAATTGGTCAACTTGGGTGACTTAAGGCTTCAGGAAAATATGCTTTCCGGTTTCATTCCTAGAGAAATGGGAATAATCCCTGCTACAATTGAAAATCTGAGCAATTTAGCATATTTGTACGTTTTTACAATTATCCATCTGGTTCCATCCCTAATGAAGTTGGAAAACTCTATTCTCTTCAGACAATCCAATTGCTCTACAATAATCTCTCTAGAAATAAACATGCTTAACAACTTGGAAATGTATAATAATAATTTCATTGGTCATTTACCTCACAACATTTGCATGAGTGGAAAGTTAACAAAGTTTACTGCTAGCATAACTATTTCACAGAAAAATAACTTTCATGGACCACTTTCCCCAAAATGGGGAAAGTGTCATAATCTTAAATGTCTAAAAATAGGAAGTATCCTTGCAAAGCTAAGTCAAGCAACCAAGTTAAGCGTGCTTCATCTATCTTCAAACCGTCTTATCGGAAGCATTCTGGAAGATATAGGTAATTTGAGCAACTTGTTCGACTTCTCACTTAATAACAATGATCTTTCAGGGAATGTTCCAATACAAATAGGATCATTGAGAGATCTTCAAATATTGGAGCTTGGAGTATATAATTTTACTAGCATAATTCCATATCAACTTGGCAATTTGTTCAAGTTAGTACATTTGAATTTGAGCCAAAATAAATTCAAAGAAAGTATTTTGAGTGGAATACCACCAATGCTAGGAGAGTTGAAAAGTCTACAAATATTGAATCTCTCACACAATAATCTTTTAGGTGATCTTTCTAGTCTTAACGAGATGGTAAGCTTGTGTGGAAATGTCTCATGCTTGGAACCATGCCGAACACTAAGCGGCCAATATCAACATCATAAGACTAATGTTGTATTAGTAATTTTATCCTTTGGTTTGGCCACTTTAATAATTGCATTATTTTCTTTTGAAGTTTCATATCATATTTGTCAAAAGTTTACCGATAAACATCTCATTGGAGTTAGAGGACAAAGAAGTGTTTATAAAGCAAACTTGCGTACAAGTCAAACTGTTGCTATGAAGAAACTTCATTCATTCAAAATTGGAGAAATTTCCAATAAAAAAGCTTTCACAAGTGAAATTCAAGCTTTGACGAAATTCCAACATCGTAACATTGTGAAGATGTACATGGCTTGTTGTCATTTACAATTCTCATTATTGATATATGAATTCTTGGAGGAGGGAAACATGAATAGGATTTTAAAAGATGATAAAAAAGAAATAGTTTTTTATTGGACTAAAAGGATTAATCAAATGCTTTATGCTATATGCATCATGACTGTTCATCACCAATTGTCCATCGAGATATATCAAGCAAAAATATTCTTTTGGATTTTGAATGTGGCTTGTGTATCAGATTTTGGAATAGTTAAGACTCTTAATCCTAATTCAACCAATTGGACCTCACTTGTGGGCTCTTTTGGATATGCTGTGTCAGAACTTGCTTACATAATAGAAGTAAATAAAAACTGCTATGTGTATAGTTTTGGGGTATTGGCATCAGAAATACTTTTTGGAGAGCACCCTCTGGATTTTTTAACTTCTTCATTGTCGACATATTTATCAAAAGTCATGAACTCAACTCTAGATGTTCCTTCATTGATAGGTAAGTTAGACCAACATCTGCCTTGTCTTACAAATCCTATTGCTCTAGAGATAGTTTTGATTGTAAGGATAGTCAATACTTGCTTGACTGAAAACCCTTATTCTTGCCCTACCATGGAACAAGTTTCCAGCGAGCTTGCAATGTTG 2178 0.343 NSPMPAMLFIFPHLQSMKFQSLWLLVLVMWFYAFKMTTSSLTTSSILQRKEANVLLKWKASLDNQSRALLSSWASNSPYIWFGITYDHSNSVSNITLRDIGLSGMLCTPNFSSLPNILTLNMSNNTLIGKICQLVNLGDLRLQENMLSGFIPREMGIIPATIENLSNLAYLYVFTIIHLVPSLMKLENSILFRQSNCSTIISLEINMLNNLEMYNNNFIGHLPHNICMSGKLTKFTASITISQKNNFHGPLSPKWGKCHNLKCLKIGSILAKLSQATKLSVLHLSSNRLIGSILEDIGNLSNLFDFSLNNNDLSGNVPIQIGSLRDLQILELGVYNFTSIIPYQLGNLFKLVHLNLSQNKFKESILSGIPPMLGELKSLQILNLSHNNLLGDLSSLNEMVSLCGNVSCLEPCRTLSGQYQHHKTNVVLVILSFGLATLIIALFSFEVSYHICQKFTDKHLIGVRGQRSVYKANLRTSQTVAMKKLHSFKIGEISNKKAFTSEIQALTKFQHRNIVKMYMACCHLQFSLLIYEFLEEGNMNRILKDDKKEIVFYWTKRINQMLYAICIMTVHHQLSIEIYQAKIFFWILNVACVSDFGIVKTLNPNSTNWTSLVGSFGYAVSELAYIIEVNKNCYVYSFGVLASEILFGEHPLDFLTSSLSTYLSKVMNSTLDVPSLIGKLDQHLPCLTNPIALEIVLIVRIVNTCLTENPYSCPTMEQVSSELAML 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02136 726 ProSiteProfiles Leucine-rich repeat profile. 378 400 IPR001611 GO:0005515
Pste5g02136 726 Gene3D Transferase(Phosphotransferase) domain 1 534 725 - -
Pste5g02136 726 PANTHER LEUCINE RICH REPEAT KINASE 2 50 725 - -
Pste5g02136 726 Gene3D Ribonuclease Inhibitor 230 419 IPR032675 -
Pste5g02136 726 Gene3D Ribonuclease Inhibitor 49 205 IPR032675 -
Pste5g02136 726 Gene3D Phosphorylase Kinase; domain 1 432 533 - -
Pste5g02136 726 Pfam Protein kinase domain 457 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02136 726 SUPERFAMILY RNI-like 94 424 - -
Pste5g02136 726 ProSiteProfiles Protein kinase domain profile. 455 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02136 726 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 294 393 - -
Pste5g02136 726 SUPERFAMILY Protein kinase-like (PK-like) 439 723 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02136 Pste-Chr5 13879892 13882929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02136 102 620 Receptor kinase-like Gene Family AT4G08850 28.061 6.33e-58 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g02136 Pkinase 7.1e-19 CL0016