Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02127 TTTTCACAATCCCTACGTAGTCCTTCAAACAAAGGCCATGGACACTTTACACTTAGACATGACTCGGCAATAGCAGCAGCCCTTGCAGGAAATGAAACTGATTTGCAAGCTTTACTTAACTTCAAAAGTAGTAGGATAGCTGAAGATCTGAAGGTGGGTGGTTTACTCTACCTGCAACGTCTAAACTTCAGCTTAAATAACTTTGATGGGAGTATTCCAAGTAATCTCAGTAACTGCACAGAACTAAGAGTACTAGCTGTAGGAGCTAACAATCTTACAGGAACAATCCCAACTTGGATAGGAAAGCTTTCTTCTTTGTCTCGCATTAGCTTTGGCTTAAACAAATTCACTGGAAGCATACCACATGAAGCAGGCCTTTTATCCAGCCTGACGTATCTTGTGCTCTATGGGAATTACTTGTCTGGCACAGCTCCTTCTTCAATCTATAACATCTCTTCCTTATACTATTTTACTTTTACTCAAAACCATCTTCATGGAAACTTACCAGCTGACGTTGGATTTACTCTTCCTAACATTCAAGTATTTGCTGGTGCTGTCAAAAATCTCACTGGATCTGTTCCTGCATCAATGTTGAATGCATCAAAACTAGAAATTCTTGACTTCTCCTTGAATAGTCTCACTGGAACACTTCCTATGAACATAGGGGTCTTACACAGGTTAACTAGACTTAGCTTTGAGTACAACAGACTTGGTACTGGGAAAACATATGACCTTAACTTTCTTGATTCTTTGGTCAACTGCATAGCTCTACAAGTTTTACGTCTAGGTGTAAATAATTTTGGTGGGGTAATACATAGAAATATACCTGTTGGAATTGGAAATCTTCCTAACTTGGACCTTATAGGATTGGAAGGAAACCAGCTAACCGGTTGTGTTCCTGATGTATTGGGTAGGCTGCAAAATCTGCAATTATTGAGAACAACTTTGAGGGAAGCAATAAGCATACCTTCTAGTCTTGGAAACTGGCAAAAGTTGTTGGTTCTCAGCCTTTACAGCAACAAGATTAGTGGCACCATACCACCAGAAGTTATTGGCCTTTCTTCTCTATCTATATACTTTGATGTATCTCATAATGAGTCTGCCTGCCGAAGGAAACATTCCTCAAACTTTAAAGAATTTGACATAGATCTTTCAAGAAATAATTTGTCTGGTAAGATTCCTGAGTTTTTGGGCAACTTCACTGAGCTCAAGCATCTAAATCTTTCATACAATAATTTTGAAGAATCTTCAAAAAATGCAACTTCCTTTTCATTATATGGAAACAGCAAGCTATGTGGTGGTATCCCAGAACTAAATTTCCCTGCATGCAATGATAAGAAGAGGAAGGCCTCTCTTCAAAGAAAGCTTCTTGCCCCTAAGGTGGCTATCCCCTATAGCTTGTGCACTTATATTACTATTATTTCTATCATGCTTTTTTACATTGTTCCCCATAAGCAAAATATAAAACTAGCACATCAACTATTGAAAAGGCTTCAGAATTGGAAATTTCTTACTCAGAGATCATCAAGTGCACTGGAAGTTTTGGCCAAAGGAACTCTCTCGGGTGATGGATCAAGTATTGCAATTAAAGTGTTAAATCTTCAACAGAGAGGAGCTTCAAGGAGCTTCATTGATGAATGCCAAGTTCTGAGAAGTATAAGGCACCGCAACCTTCTCAAAATCATAACTGCCACCTCAGGGGTTGATCATCATGGCAATGACTTCAAAGCTCTAGTGTTTGAGTATATGTCTAATGGAAGTCTAGAAGATTGGTTGCATCCTGTAAATAATGTGCAATATCAGACCAAGACACTGACAGTTATCCAAAGACTGAACATAGCAATTGATGTTGCTTGTGCAATGGAATATCTCCACCACTTTTGTGAAACTCCAATTGCTTATTGTGACATAAAGGCAAGCAATGTACTTCTAGACAATGATATGGTTGCCCATGTTGGTGATTTTGGATTAGCTACATTTCTGTTTGAAGAATCAGGCAAGTTTTCCACACACAGTTATGTTACATTAAATTTATTAAAAAATGGTCTACTAATAAGTGAAATGCAGAGTATGGTATGGGTGGGAAGCCTTCTACACTTGGAGATATCTACAGTCATGGGATACTATTACTGGAGATTTTCAAAGGAAAAAGACCAACAGATGAAGCATTTGAAGGTGGCATGGGAATTCACTAGTTTCTCGAAAAGGCTCTACTTAAACCATGTCATGGATATAGTTGATCCTTTATTAAATTCTGAACAAGACTTTGAAGAAGAAAATCAAGAATTTGAGGGTGAAGACTTTGAAGGAGGAACTACGACATTAAAGCCACGGCTAAAGGATAGCTTTGTGTCACTAATGCAAATTGGATTGTCTTGTTCAGCAAATCTACCTAGTGAACAAATAGTCATGTACTTAATCCTTGATGATATGACACTGACTGGCACTGTTCCACCATCTATAGGAAATCTCACATTCCCCACCAGACTAAACCTCCGAAATAGTAGTTTCCATGGAGAGATTCCTCAAAAAGTGGGACATTTACAATTCTTGCAACATATAAACATTAGTTACAATTCTTTTGGTGGTAGTATTCCAAGTAATCTAAGCCACTGCACAGAACTAAGTATAATATCTGCTGGTCATAACACCTTCACAGGAACAATTCCAGCGTGGATAGGAAATTCTTCATCTTTATCTTTACTTAACCTAGCCGTGAACAACTTGCACGGAAACATACCAAATGAGGTAGGCCTATTATCAAGCTTGACACTTCTTGCACTGAATGGGAATTACTTATCTGGAACAATTCCTCCTCCTATTTTTAATATTTCTTCCTTATTCTTTTTCACTGTTTCTCAAAACGATCTGCATGGTACCATACCAGCTGATGTTGGTTACACTCTTCCTAATCTTGAAATATATGCTGGTGGAGTCAACAGCTTCAGTGGAACTTTTCCTGAATCACTGTCAAATGCATCAAGTCTAGAAATTCTTGATTTTGCAGAGAATGGTTTCACTGGCACACTTCCTAATAGCATAGGAAGATTGACCCATTTAATAAGACTCAATTTTGATGACAATAGACTTGGAATTGGGAAAGCTGGTGATCTGAATTTTCTTGCTTCCTTGGTTAATTGTACCTCTCTTGAAGTTTTGGGACTTGCAGATAATAGTTTTGGAGGAGAATTGCCTAGTTCAATTGCAAATGTTTCAACCCAATTAACTATACTTACTTTAGGTCGCAATGGAATAGATGGAAGTATCCCAATTACGATCAGAAACCTTGCTAACTTAACTGTTCTAGCATTGGAAGAGAACAACCTAAGTGGCTCTGTTCCTCATACAATAGGTATGCTTCAAATGTTAAATGGTTTGGAATTGAATAGTAACAAATTTTCTGGGGTGATCCCTTCATCCATTGGGAACCTGACAATGTTAACAAGGCTACTCGTGGGGGATAACAACTTTGAGGGAAGTATACCTGCTAGTCTAGGAAAATGCCAAAGCTTGTTGATGCTAAATTTTAGCTGTAACAGTCTCAATGGTACCATACCTAGGCAAGTCCTTGCCTTGTCTTCTCTTTCAATTTACTTGGACTTGTCTCATAATGCTTTGACAGGGTCTGTGCCTGTTGAAGTGGGCAAGTTGGTTAATCTTGCTAAGTTGGACCTCTCAGATAACAAATTGTCTGGCATGATTCCATCCTCTCTTGGAAGCTGTATTAGTTTGGAACGAATACATTTGCAGGGTAACATTTTTGAGGGAAACATTCCTTTAACTATGAAGAATTTGAGAGGCTTACAAGATATAGATCTGCCATGCAATAACTTGTCCGGGGAGATTCCTGAATTTCTTGCTGAGTTCCAAGCGCTAGAGCATCTCAATCTTTCTTACAATGATTTCACTGGCAAAATACCAATGAATGGAATCTTCAAGAATGCAACTTCCTATTCAGTGTATGGAAACAGCAAGCTCTGTGGTGGTGTCCCAGAGTTAGATTTACCTGCATGCACCATAAAAAAAGCCTCTTCCTTCAGAAACTTTCATGACCCTAAGGTGGTTATCACTGTAATTTTAGCACTTGTTTTTGCGCTCTTTCTATTTTGTTTTCTTGCAATCTTTATGATAAAAAGAGCCAGAAAGAAAGCTTCAAGATCAACTACAAGCAAAGATTTGGAATTTCAAATTTCATACTCAGAAATTGCAAAATGCACTGGTGGATTTTCCCAAGATAACCTGATTGGCTCAGGAATTAAAGTATTAAATCTTCAACAAAGAGGAGCTTCGAAGAGCTTCATTGATGAATGCCAAGTTCTAAGAAGTATAAGGCACCGCAACCTTCTCAAGATCATAACTGCCATCTCAAGTGTAGATCATCAAGGTAATGACTTCAAAGCATTGTTGTTTGAGTTCATGCCAAATGGAAGTTTGGAAGATTGGTTGCATCCTGTAGATAATATTGTACATAAACAGAAAAAGACATTGTCATTTATCCAAAGACTGAACATAGCAATTGATGTTGCTTGTGGCCTGGAATATCTCCACCACTTTTGTCATACTCAATTGTTCATTCCAAGTAATGTGCTTCTTGACAATGATATGGTGGCACACGTTGGTGACTTTGGATTAGCCACATTTCTGTTTCCAGAATCAAACAATTCTCCCCAACAATCAACCATGTCATGCGTGCTAAAGGGCTCTATTGGGTACATCCCTCCAGAATATGGAATGGGTGGCCAACCTTCAGCACTGGGAGATGTATACAGTTATGGGATACTATTACTTGAGATGTTGACAGGAAAAAGACCAACAGATGATATGTTTGAAGAAACTCACCAGTTTAGAGCCTTGGCATTACCGAATCATGCCATGGAAATAATTGATCCTTTATGGCTCCCTAAGCAAGAATTTGGTGATAGAGCTAAAGAAGTTTCCACAGAGGAGGAATCACTGTTGGGCATAGGAGTGTCATGCTCTTCAACTTCACCACGTGAAAGGGTGCCAATGACT 5013 0.3856 FSQSLRSPSNKGHGHFTLRHDSAIAAALAGNETDLQALLNFKSSRIAEDLKVGGLLYLQRLNFSLNNFDGSIPSNLSNCTELRVLAVGANNLTGTIPTWIGKLSSLSRISFGLNKFTGSIPHEAGLLSSLTYLVLYGNYLSGTAPSSIYNISSLYYFTFTQNHLHGNLPADVGFTLPNIQVFAGAVKNLTGSVPASMLNASKLEILDFSLNSLTGTLPMNIGVLHRLTRLSFEYNRLGTGKTYDLNFLDSLVNCIALQVLRLGVNNFGGVIHRNIPVGIGNLPNLDLIGLEGNQLTGCVPDVLGRLQNLQLLRTTLREAISIPSSLGNWQKLLVLSLYSNKISGTIPPEVIGLSSLSIYFDVSHNESACRRKHSSNFKEFDIDLSRNNLSGKIPEFLGNFTELKHLNLSYNNFEESSKNATSFSLYGNSKLCGGIPELNFPACNDKKRKASLQRKLLAPKVAIPYSLCTYITIISIMLFYIVPHKQNIKLAHQLLKRLQNWKFLTQRSSSALEVLAKGTLSGDGSSIAIKVLNLQQRGASRSFIDECQVLRSIRHRNLLKIITATSGVDHHGNDFKALVFEYMSNGSLEDWLHPVNNVQYQTKTLTVIQRLNIAIDVACAMEYLHHFCETPIAYCDIKASNVLLDNDMVAHVGDFGLATFLFEESGKFSTHSYVTLNLLKNGLLISEMQSMVWVGSLLHLEISTVMGYYYWRFSKEKDQQMKHLKVAWEFTSFSKRLYLNHVMDIVDPLLNSEQDFEEENQEFEGEDFEGGTTTLKPRLKDSFVSLMQIGLSCSANLPSEQIVMYLILDDMTLTGTVPPSIGNLTFPTRLNLRNSSFHGEIPQKVGHLQFLQHINISYNSFGGSIPSNLSHCTELSIISAGHNTFTGTIPAWIGNSSSLSLLNLAVNNLHGNIPNEVGLLSSLTLLALNGNYLSGTIPPPIFNISSLFFFTVSQNDLHGTIPADVGYTLPNLEIYAGGVNSFSGTFPESLSNASSLEILDFAENGFTGTLPNSIGRLTHLIRLNFDDNRLGIGKAGDLNFLASLVNCTSLEVLGLADNSFGGELPSSIANVSTQLTILTLGRNGIDGSIPITIRNLANLTVLALEENNLSGSVPHTIGMLQMLNGLELNSNKFSGVIPSSIGNLTMLTRLLVGDNNFEGSIPASLGKCQSLLMLNFSCNSLNGTIPRQVLALSSLSIYLDLSHNALTGSVPVEVGKLVNLAKLDLSDNKLSGMIPSSLGSCISLERIHLQGNIFEGNIPLTMKNLRGLQDIDLPCNNLSGEIPEFLAEFQALEHLNLSYNDFTGKIPMNGIFKNATSYSVYGNSKLCGGVPELDLPACTIKKASSFRNFHDPKVVITVILALVFALFLFCFLAIFMIKRARKKASRSTTSKDLEFQISYSEIAKCTGGFSQDNLIGSGIKVLNLQQRGASKSFIDECQVLRSIRHRNLLKIITAISSVDHQGNDFKALLFEFMPNGSLEDWLHPVDNIVHKQKKTLSFIQRLNIAIDVACGLEYLHHFCHTQLFIPSNVLLDNDMVAHVGDFGLATFLFPESNNSPQQSTMSCVLKGSIGYIPPEYGMGGQPSALGDVYSYGILLLEMLTGKRPTDDMFEETHQFRALALPNHAMEIIDPLWLPKQEFGDRAKEVSTEEESLLGIGVSCSSTSPRERVPMT 1671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02127 1671 Pfam Protein kinase domain 518 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02127 1671 SUPERFAMILY L domain-like 804 1030 - -
Pste5g02127 1671 SUPERFAMILY RNI-like 952 1312 - -
Pste5g02127 1671 ProSiteProfiles Protein kinase domain profile. 1360 1671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02127 1671 FunFam LRR receptor-like serine/threonine-protein kinase EFR 1040 1344 - -
Pste5g02127 1671 SMART LRR_typ_2 1217 1241 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 127 150 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 1289 1314 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 1096 1120 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 1144 1168 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 848 872 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 920 944 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 400 423 IPR003591 -
Pste5g02127 1671 SMART LRR_typ_2 282 305 IPR003591 -
Pste5g02127 1671 Gene3D Ribonuclease Inhibitor 1036 1346 IPR032675 -
Pste5g02127 1671 SUPERFAMILY RNI-like 60 431 - -
Pste5g02127 1671 Gene3D Transferase(Phosphotransferase) domain 1 1477 1671 - -
Pste5g02127 1671 Gene3D Ribonuclease Inhibitor 759 1035 IPR032675 -
Pste5g02127 1671 Gene3D Ribonuclease Inhibitor 185 445 IPR032675 -
Pste5g02127 1671 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Pste5g02127 1671 SUPERFAMILY Protein kinase-like (PK-like) 1388 1669 IPR011009 -
Pste5g02127 1671 PANTHER OS04G0122200 PROTEIN 920 1664 - -
Pste5g02127 1671 Gene3D Transferase(Phosphotransferase) domain 1 499 687 - -
Pste5g02127 1671 ProSiteProfiles Protein kinase domain profile. 501 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02127 1671 Pfam Protein tyrosine and serine/threonine kinase 1418 1612 IPR001245 GO:0004672|GO:0006468
Pste5g02127 1671 Gene3D Phosphorylase Kinase; domain 1 1398 1476 - -
Pste5g02127 1671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Pste5g02127 1671 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1473 1671 - -
Pste5g02127 1671 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 24 254 - -
Pste5g02127 1671 SMART serkin_6 1409 1653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02127 1671 SUPERFAMILY Protein kinase-like (PK-like) 510 723 IPR011009 -
Pste5g02127 1671 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 797 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02127 Pste-Chr5 13785138 13795149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02127 58 673 Receptor kinase-like Gene Family AT3G47570 33.559 4.38e-104 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste5g02127 PK_Tyr_Ser-Thr 8.4e-27 CL0016