Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02126 AACCCTCTTTTGGCTTTCTAGCTTTGTACTTTTCCTCTTTCTCTTTTTTATCGTATTTGTTCTTTATTCCCCTACCGCTAACATGGCCATTAGTCCTCAAGATGAAGATAGTTTCATTTTCCAGCTTGGTATATTTAGTAAGATTGTAAAGCTCAGTGGTGCCCAAGACTTGGTGTCTCTGATAACAAGTATAGCTAGGAGGAGACATCATCATCACCCAAGGAGACATATGGGAAAATGTGATGGGGCAAAATGGGATTCCAAGCTTATTCAAGACTATAAAGTCTCTCTTGTTCTCACGGTTGACTTAAAGGGCTGTGCTAACTTCAGTAGCGTGCAAAAAGCTGTTGATGCTGTTCCTGAATCTAGCTCTGACACCACGCTTATCATAATCGATTCTGGTACATACAGGGAGAAGGTAGTAGTGCAGGCAAACAAAACAAACTTGATAGTTCAAGGTAAAGGGTATCTGAATACAATCATCGAATGGGATGACACTGCAAATTCCACTGGCGGTACATCCTATAGCTACTCCTTTGCCGTCTTTGCTTCAAAGTTCACTGCTTACAACATCAGCTTTAAGAACACGGCTCCTCCACCCTCACCAGGAGTGGTTGGAGCACAAGCAGTGGCACTGAGGGTTACAGGCGATCAATCTGCTTTCTATAGGTGTGGATTTTATGGTGCGCAAGACACACTCAATGATGATGCTGGGAGACATTATTTTAAAGAATGCTTCATCCAAGGATCCATTGATTTCATATTTGGAAATGCTAGATCACTTTATGAGGATTGTAGCATAAATTGTGTAGCAAAAGAAGAGGGGATTGGTGTTAGCGGGTCGATAACCGCTCAGGGGCGGCAATCGATGGAAGAGGAAAGTGGGTTTTCATTTGTGAATTGTAGCATTGTTGGGAATGGGAGAGTGTGGCTTGGAAGAGCATGGGGACCCTATGCCACTGTGGTCTTCTCAACAACATACATGTCTGATGTGGTAGCTCCTGAGGGATGGAATGATTGGAGAGATCCCACTAGAGATCAGACCGTCTTCTTTGGGGAGTACCTTTGTCATGGACCTGGAGCAAACTATACATCCAGAGTCTCTTATTCCAAGCAACTCAGGGATTACCAAGCAAACTCCTTCATCAATATTTCCTACATTGATGGAAATGATTGGCTTGTTAATTATTTTCAAGACTACGTTAACCCTTCATATATC 1219 0.4274 MAISPQDEDSFIFQLGIFSKIVKLSGAQDLVSLITSIARRRHHHHPRRHMGKCDGAKWDSKLIQDYKVSLVLTVDLKGCANFSSVQKAVDAVPESSSDTTLIIIDSGTYREKVVVQANKTNLIVQGKGYLNTIIEWDDTANSTGGTSYSYSFAVFASKFTAYNISFKNTAPPPSPGVVGAQAVALRVTGDQSAFYRCGFYGAQDTLNDDAGRHYFKECFIQGSIDFIFGNARSLYEDCSINCVAKEEGIGVSGSITAQGRQSMEEESGFSFVNCSIVGNGRVWLGRAWGPYATVVFSTTYMSDVVAPEGWNDWRDPTRDQTVFFGEYLCHGPGANYTSRVSYSKQLRDYQANSFINISYIDGNDWLVNYFQDYVNPSYI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02126 379 Gene3D - 66 373 IPR012334 -
Pste5g02126 379 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 366 - -
Pste5g02126 379 Pfam Pectinesterase 73 363 IPR000070 GO:0030599|GO:0042545
Pste5g02126 379 SUPERFAMILY Pectin lyase-like 69 368 IPR011050 -
Pste5g02126 379 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Pste5g02126 379 FunFam Pectinesterase 66 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02126 Pste-Chr5 13783575 13786282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02126 47 366 Carbohydrate Esterase AT1G05310 54.489 3.25e-122 357