Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02108 CCCAATTGACGTCTTATGAATTGTAATTCAGCTAGGTGACTAAAAGAGGGTTCTTCTTTTGTTGCATTTAAAAGTAACTTTGAAAAGCTAGTCAATTCTTTTAAAATCAATCAACATACACGTAGCTCATCTAAATCAAAAGGATGTGCAATATTCTCCAATAAATAGCCTTGGTTCGTACCAGACAGATTGTTCAGTTTCATTTCATCAACTATTTTCTTTCGAGTTTCATCTTCTTTCAAGCAATGGCTAATGGAAACGGCTCATTCAAGTCAAAGCCAACAAGTGACACCAAGGGAAAGACCATCACTTGCAAAGCGGCGGTGGCTTATGGTCCGGGAGAACCCTTGGTGGTGGAAGAAATAATTGTTCATCCTCCTAAGAAAATGGAGGTTCGAATCAAGATCATCTACACCTCCATTTGTCACACCGATATCAGCGCTTGGAGAGGCGAGAACGAGGCTCAGCGTGCATACCCTCGGATACTGGGGCATGAAGCATGTGGGATTGTGGAGAGTGTGGGGGAAGGGGTGAGAGAAGTGAAGGAAGGGGACATAGTGGTGCCAATATTTAATGGGGAGTGTGGAGAGTGCAGGAGTTGCAAGTGTGAGAAGAGCAACATGTGTGAGAGGAATGGGGTGAACCCAATGAAGAAGGTTATGGAAGGGGATGGCACAACCAGATTCTCAACCCTTCAAGGGAAACCCATATTCCATTTCTTGAACACTTCAACTTTCTCTGAGTACACCGTCGTCGATTCACCTTGTCTTGTCAACTTTCTTCACCCACAACTCTCTCTCTCTCTCAAACACCTCACCTTGCTCAGCTGTGGCGTCTCCACAGGGGTTGGAGCAGCTTGGAACACAGCTAATGTGCATTCTGGTTCATCTGTGGCTGTTTTTGGTTTAGGAGCTGTTGGGCTTGCTGTTGCAGAAGGGGCACGAGCCAGAGGTGCATCTAAAATAATAGGCGTGGACATCAACCCTGACAAATTCATCAAAGCCCAAGCTATGGGAGTTACAGACTTCATAAACCCAAAGGATGAAGAGAAGCCAGTATATGAGATAATTAAAAATATGACTGATGGAGGTGTAGACTACAGTTTTGAATGTACTGGAAACGTGGACGTTCTAAGAGATGCCTTCTTGTCTGCTCATTTGGGTTGGGGATTGACTGTAGTGTTGGGAATCCATGCATCTCCAAGGTTGCTTCCCATCCACCCAATGGAGCTCTTCGATGGTCGCAATATTGTAGGATCAGTATTTGGAGGTTTCAAAGGGAAAAGTCAATTGCCTCATTTTGCCAAACAATGTGGACATGGAGTTGTGAAGCTGGATAATTTCATCACTCACGAGCTACCCCTTGAGGAGATAAACAAAGCCTTCGATCTTTTGATTGCTGGGAAGTCACTAAGATGTCTTCTACACTTCTAAGAAAAAAGGCCCTTTAGAATGGCTATTATTATTATTATTAATAATTTTTTATTATTATCTGAATCGTTCATTATAAGCGTATCTAAATATATATGAATATGTGGAGTAGTTTTGGAAAGGTTTTAGGGTGCTTTTGAACAGTGTACTAGAGCCAAAAATAAAATAAGTGCAAATGTACTCAGCTATGTTCACCTCCCATCACTTGATAATTGAGTGTGCACTGCTGCAGTGCTGCTACTTTTTCTCTATTTTTTTGCAGTCCAA 1697 0.4243 MANGNGSFKSKPTSDTKGKTITCKAAVAYGPGEPLVVEEIIVHPPKKMEVRIKIIYTSICHTDISAWRGENEAQRAYPRILGHEACGIVESVGEGVREVKEGDIVVPIFNGECGECRSCKCEKSNMCERNGVNPMKKVMEGDGTTRFSTLQGKPIFHFLNTSTFSEYTVVDSPCLVNFLHPQLSLSLKHLTLLSCGVSTGVGAAWNTANVHSGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGVTDFINPKDEEKPVYEIIKNMTDGGVDYSFECTGNVDVLRDAFLSAHLGWGLTVVLGIHASPRLLPIHPMELFDGRNIVGSVFGGFKGKSQLPHFAKQCGHGVVKLDNFITHELPLEEINKAFDLLIAGKSLRCLLHF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02108 395 FunFam Alcohol dehydrogenase 6 26 212 - -
Pste5g02108 395 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Pste5g02108 395 FunFam S-(hydroxymethyl)glutathione dehydrogenase 200 338 - -
Pste5g02108 395 SUPERFAMILY GroES-like 16 219 IPR011032 -
Pste5g02108 395 Gene3D - 26 390 - -
Pste5g02108 395 Pfam Alcohol dehydrogenase GroES-like domain 49 139 IPR013154 -
Pste5g02108 395 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 185 355 IPR036291 -
Pste5g02108 395 Gene3D - 200 338 - -
Pste5g02108 395 PANTHER ALCOHOL DEHYDROGENASE 18 392 - -
Pste5g02108 395 Pfam Zinc-binding dehydrogenase 223 342 IPR013149 -
Pste5g02108 395 SUPERFAMILY GroES-like 345 395 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02108 Pste-Chr5 13663452 13669761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02108 49 384 Monolignol Biosynthesis Gene Families AT2G21890 26.844 3.51e-12 65.5