Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02104 ATAGACTTGGTTTCGTGAACAATACATGCATAGATAGCTATGTAGCCAGTGGTGACAGACAAGATAGAGATTACACAAAGTGACACTTCGAGGTTTGTGCAGCAGCAAGGCTTATCAAATCACAATTAACTTGCATAGCCTTCGTGTCATTACATTGCTTGCCAAAATCTTGCAGAGGTATCTAGCCAGCTAGCTATACCAAATGGCTTCTCACCAAGCAGAACCATGGCTGTTGGAGAATGGGAAACCGAAGGTGTTGACCAAGGAGATGAGGCATGGCCGCACAGCGCACAGCAGATCCTCAAACTCCCTTCGCAGGAGGTCTGACCTTACTCTTGTCTCCAAGGTTCCATGTTCCTCTCTCAGAGACATTCTTGCCAACTTACAAGAGGTTATTCTTGGAACCAAGCTTTCCATTCTCATCCCTGCCATTCCCGCTGCCATCATTGCTCACTGCTATGGCTTTGGAAGATCATGGATTTTTATATTTAGCTTACTTGGACTTACTCCACTCGCCGAACGTGTGAGCTTCATCACAGAACAAGTTGCCTTCTACACTGGTCCCACAGTTGGAGGACTTCTGAATGCAACGTGTGGAAATGTTACTGAGCTCGTAATAGCAATATTTGCCCTTAGTAGTAACAAGATTGCTGTGGTCAAGTATTCTCTATTGGGTTCTATTCTTTCAAACCTTCTTCTGGTTCTTGGGACCTCTCTATTGTGTGGTGGCATAGCAAACCTTAGAGTGGAACAAAAATATGATAGAAGGCAAGGAGATGTGAACTCACTTATGTTGCTGCTGGCATTATTGTGCTACTTACTTCCAATGCTGTTCAAATATACTGCTGCCTCAGCTTCTCTTACTGTTGACCCTTCACTCCACTTGTCAAGAGCTTCTAGCATTGTGATGTTGATAGCATATTTTGTTTACATTATCTTTCAACTGTGGACACACAGAGATTTATTTGAAGATGAAGATGAGGATGAAGATGACAACAATTGTTCACAAGAACAAGCTGTCATTGGACTCTGGAGTGGCATTGCTTGGCTTGTTGGGATGACTGTATTCATTGCTATCTTGTCTGAATATGTGGTGGATACAATAGAGGATGCATCAGATTCATGGGGATTGTCTGTGAGCTTTCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCATTGGGTTCAGCAACTCAGATTGCCGTGTTTGTGGTCCCTTTATGTGTGGTCGTAGCTTGGATAATGGGTGTCAATATGGACTTGAACTTCAATCTCCTAGAGACAGGTTCCCTAGCTTTGGCAGTAATAGTCACAAGCTTCACTTTACAGGATGGCACGTCCCACTACATGAAAGGCCTTGTTCTTCTGCTGTGCTACATTGTTATTGGGGCATACCATGCTAATGTTACCAAAGTCATGCTTAACCCAGCCACCGATGCAGTTTTGAGCGCTTAGTAGGCATTGGCCTATTTTTGTCCCTTAGTGGGATGAAGAATGGTGGCATCCAAACCCAAAATCAGATTCAAATGGATTGGTTATGGTTTCATTCTGATCACCTTGTCATATCCATAATGAAGGGAGCAAAAATTTGCAGTAGCTTTGCAAGTATTTTTAGTTGCAAGCTGTGAATAGACCACTGCATGGGCAAGATGTTCAATCATTAGTGTGTTCTATCAGAGAGCTGCTTTTCATCCTGTAGTTGGGTAGATGCCAAATGAGTGGAAAATTGTTGTTGTTTGAGTTTGCTTTAGTAAGAATCCCTTCTCTTTTTGCAGAATCTCTTGTATTTATTGTGTTACTATCACTATTTGTACAACCTCTTCTAAGGGTAATAAAAATTCTATTTATGCTTGTTTTTTCTTAA 1931 0.4205 MASHQAEPWLLENGKPKVLTKEMRHGRTAHSRSSNSLRRRSDLTLVSKVPCSSLRDILANLQEVILGTKLSILIPAIPAAIIAHCYGFGRSWIFIFSLLGLTPLAERVSFITEQVAFYTGPTVGGLLNATCGNVTELVIAIFALSSNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLRVEQKYDRRQGDVNSLMLLLALLCYLLPMLFKYTAASASLTVDPSLHLSRASSIVMLIAYFVYIIFQLWTHRDLFEDEDEDEDDNNCSQEQAVIGLWSGIAWLVGMTVFIAILSEYVVDTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVVVAWIMGVNMDLNFNLLETGSLALAVIVTSFTLQDGTSHYMKGLVLLLCYIVIGAYHANVTKVMLNPATDAVLSA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02104 439 FunFam Vacuolar cation/proton exchanger 267 422 - -
Pste5g02104 439 Gene3D - 267 422 IPR044880 -
Pste5g02104 439 Gene3D - 121 259 IPR044880 -
Pste5g02104 439 FunFam Vacuolar cation/proton exchanger 121 265 - -
Pste5g02104 439 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016020|GO:0055085
Pste5g02104 439 Pfam Sodium/calcium exchanger protein 280 417 IPR004837 GO:0016020|GO:0055085
Pste5g02104 439 NCBIfam calcium/proton exchanger 56 418 - -
Pste5g02104 439 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 418 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pste5g02104 439 NCBIfam calcium/proton exchanger 74 417 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02104 Pste-Chr5 13645785 13649722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02104 1 417 Antiporters AT2G38170 69.249 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02104 5 13645785 13649722 Pste5g02104 5 13645785 13649722 ECH
Pste5g02104 5 13645785 13649722 Pste6g00842 6 3250260 3256056 PCT