Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02095 AATTACTTTAAGAAAGCTGAAGCTGCATGCATGCCATGGCGTTCCCTTTGGGAGTCCTCATGACCACACCATTGCTCTTTTTTGTTGCATTTTCAGTTCCTAAAGTCCAGGCAAGCTCATGGGAACATGCAGCGTATAACATGGTTGGAGGTCATAACAAGATAGTCGACCTCAACAGACATCAACCTGTTTTTCAGCCTGGCCCATGGAACCAAGCTCATGCTACGTTCTATGAGGGAGGTTCCACAACATTTGGTGGAGCGTGTGGGTACGAGGATGTGGTTAAAGAGGGTTATGGGCTTGACACAGCAGCATTGAGCTCAGTTTTGTTCAAGGAGGGTGAGACATGTGGGGCATGTTACGAGATAAAATGTATAAAGTCTCATCAATGGTGTAAGGCAGGGGAACCCTCTATTTTTGTGACGGCAACGAACCTTTGCCCCCCAAATTATTCTGAACCAAGTGACAAGGGAGGATGGTGCAACCCTCCTCGGCAGCACTTTGATTTAGCCAAACCTGCTTATCTCAAAATTGCAGCTTACAAGGCTGGCATCGTGCCTGTCCAATATCGCAGGGTAGCATGCAAGAAGGAAGGAGGTATGAGGTTCACAATAAGCGGGAATCCATACTTCAATCTAGTACAAGTGTGGAACGTAGGAGGAGCTGGGGACATAACACAAGTGGAAGTGAAGGGTGATAAGAAAGTGGTTAATTGGCAAAGTTTGAAGAGAAATTGGGGTCAGAATTGGGAAACCAATGTCATGCTAAAGGGAGAGACGTTGACATTCAGGGTCAGAGCCAGTGATGGAAGGTACTGCACCTCACCCAGAGTTGCCCCCAACAATTGGCACTTTGGTCAAACCTTTCAAGGCAAAAACTTCCCT 884 0.4683 MHAMAFPLGVLMTTPLLFFVAFSVPKVQASSWEHAAYNMVGGHNKIVDLNRHQPVFQPGPWNQAHATFYEGGSTTFGGACGYEDVVKEGYGLDTAALSSVLFKEGETCGACYEIKCIKSHQWCKAGEPSIFVTATNLCPPNYSEPSDKGGWCNPPRQHFDLAKPAYLKIAAYKAGIVPVQYRRVACKKEGGMRFTISGNPYFNLVQVWNVGGAGDITQVEVKGDKKVVNWQSLKRNWGQNWETNVMLKGETLTFRVRASDGRYCTSPRVAPNNWHFGQTFQGKNFP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02095 286 SUPERFAMILY PHL pollen allergen 188 282 IPR036749 -
Pste5g02095 286 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 201 282 IPR007117 -
Pste5g02095 286 SMART dpbb_1 94 181 IPR007112 -
Pste5g02095 286 PRINTS Expansin signature 268 284 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 89 103 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 190 202 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 149 166 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 239 260 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 116 127 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 130 140 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 166 179 IPR002963 GO:0009664
Pste5g02095 286 PRINTS Expansin signature 202 223 IPR002963 GO:0009664
Pste5g02095 286 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 77 191 IPR007112 -
Pste5g02095 286 PRINTS Expansin/Lol pI family signature 60 75 IPR007118 GO:0005576
Pste5g02095 286 PRINTS Expansin/Lol pI family signature 268 282 IPR007118 GO:0005576
Pste5g02095 286 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Pste5g02095 286 PRINTS Expansin/Lol pI family signature 98 116 IPR007118 GO:0005576
Pste5g02095 286 PRINTS Expansin/Lol pI family signature 174 190 IPR007118 GO:0005576
Pste5g02095 286 Pfam Expansin C-terminal domain 192 271 IPR007117 -
Pste5g02095 286 Gene3D - 191 285 IPR036749 -
Pste5g02095 286 Gene3D - 45 187 IPR036908 -
Pste5g02095 286 SUPERFAMILY Barwin-like endoglucanases 60 209 IPR036908 -
Pste5g02095 286 CDD DPBB_EXPA_N 60 186 - -
Pste5g02095 286 PANTHER EXPANSIN-A15 29 285 IPR002963 GO:0009664
Pste5g02095 286 Pfam Lytic transglycolase 94 181 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02095 Pste-Chr5 13527268 13529178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02095 55 285 Expansin Gene Family AT3G55500 62.232 4.98e-109 315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02095 5 13527268 13529178 Pste5g02095 5 13527268 13529178 ECH