Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02082 AAAAAATCGCAACCCCAGCCGTTACCGTACACCCGCACACACCCTTCTCCCTTCAGTCACTCAGGGTCACACTGATTTGCACTGTCTCGCCTTCGCATCTTTCTCCTCAGCCACCTTCAATCTCATCCTCCTTTTCAAAACCACACACACTCTCTAGGGTTAGGGTTAGGGTTTCAGCATTATGATGTGAAACCCTAGCACGCGCCCAGTCTCCTCTACCAAACCCTCCCGATCTCCTCCGCCATGGGCAACTGCTGCAGATCCCCGGCCGCCGTGGCTCGGGAGGATGTCAAATCCAGCTTCTCCAACGCCGACCACCACGGCAAATCCGCTGCCGCCGCCGCCAAACAGAAGGCGCCGATCACGGTGCTCGCCGGCGTGCCCAAGGAGAACATCGAGGACCGGTACCTCGTGGACCGGGAGCTCGGCCGCGGCGAGTTCGGGGTCACCTACCTCTGTATCGACCGCGACACGCGCGAGCTCCTCGCCTGCAAGAGCATCTCCAAGCGGAAGCTCCGGACCGCCGTCGACGTCGAGGACGTCCGCCGCGAGGTCGCTATCATGCGCCACCTCCCCGAGAGTCCCAGCATCGTGTCGCTCCGCGAGGCCTGCGAGGACGACAATGCCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTTGACCGGATCGTCGCCCGCGGTCACTACACCGAGCGCGCCGCCGCCGCTGTCACCAGGACCATTGTCGAGGTCGTGCAGCTCTGCCACAAGCACGGGGTCATTCACCGCGACCTCAAGCCGGAGAACTTTTTGTTTGCCAACAAAAAGGAGAATTCGCCGCTCAAAGCTATTGACTTTGGGCTCTCTATATTCTTCAAGCCGGAGGTGGATCTCTACATGCCTCCTTCTGAGCTTGTAATGGTGGATAGAGATGCCATGATGGGGGTGTGTGTGACTAGGACTGCTGAAAGTGCTGGCTATGATGATGGCAATTGTCTGAAGCTCTGGCATTTCTTGGGATGTGAGAGGTTCTCAGAAATTGTGGGAAGTCCATATTATATGGCTCCAGAAGTTCTCAAGCGGAATTATGGACCAGAAATAGATATATGGAGTGCAGGAGTAATTCTCTACATCTTATTGTGTGGTGTTCCACCATTCTGGGCTAAATCTGAGCAAGGAGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAAAGGGAACCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGCCTTGTTAGGCAAATGCTAGAACCAGACCCTAAGCTTCGGCTAACTGCCAAACAAGTGCTTGAGCATCCCTGGCTCCAAAATGCTAAAAAGGCTCCTAACGTTCCACTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAATTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCCGATTTCTTATCCAATGAAGAAGTTGAGGACATCAAAGATATGTTCAAGAAGATGGATAATGATAATGATGGCATTGTTTCCATTGAAGAACTGAAAGTTGGACTTCGAAACTTTGGGTCTCAACTTGCTGAGTCTGAAGTTCAGTTGCTTATTGAAGCTGTAGATAGTAATGGTAAGGGAACACTAGACTACGGAGAATTTGTTGCTATTTCCCTTCATTTAAAAAGGATGGCTAATGACGATCATCTTCACAAGGCCTTCTCGTATTTTGACAAAGATGGGAATGGATATATTGAACCAGATGAGTTACGGAATGCCTTGATGGAAGATGGGGCAGATGACTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTTGACACAGACAAGGATGGACGTATCAGCTACGATGAATTTGTTGCTATGATGAAAACGGGAACGGATTGGAGAAAAGCTTCAAGGCATTACTCACGTGGAAGATTCAATAGCTTGAGCTTAAAATGGGTTCCTTTCCACTTGGTGCTGTGGGAGTCTCTGAAGGATTGGGTACGCCAATTATACATGCTCTTTGTTACTTGTGTAAAACATGGTGCCTTGGAGCCAATGCATGAGCCTGTAAGATATGCTGGTGGTTCTGGAGGTGAGAGGTTCTCAGAAATTGTGGGAAGTCCATATTATATGGCTCCAGAAGTTCTCAAGCGGAATTATGGACCAGAAATAGATATATGGAGTGCAGGAGTAATTCTCTACATCTTATTGTGTGGTGTTCCACCATTCTGGGCTGAATCTGAGCAAGGAGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAAAGGGAACCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGCCTTGTTAGGCAAATGCTAGAACCAGACCCTAAGCTTCGGCTAACTGCCAAACAAGTGCTTGAGCATCCCTGGCTCCAAAATGCTAAAAAGGCTCCTAACGTTCCACTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAATTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCCGATTTCTTATCCAATGAAGAAGTTGAGGACATCAAAGATATGTTCAAGAAGATGGATAATGATAATGATGGCATTGTTTCCATTGAAGAACTGAAAGTAGATAGTAATGGTAAGGGAACACTAGACTACGGAGAATTTGTTGCTATTTCCCTTCATTTAAAAAGGATGGCTAATGACGATCATCTTCACAAGGCCTTCTCGTATTTTGACAAAGATGGGAATGGATATATTGAACCAGATGAGTTACGGAATGCCTTGATGGAAGATGGGGCAGATGACTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTTGACACAGACAAGGATGGACGTATCAGCTACGATGAATTTGTTGCTATGATGAAAACGGGAACGGATTGGAGAAAAGCTTCAAGGCATTACTCACGTGGAAGATTCAATAGCTTGAGCTTAAAGTTGATGAAAGACGGTTCTTTAAACTTAGGAAATGAGTAGTTGTCCAAGTGTTTGCCTATATTCGATCTGTCTTTCCAAATAGTGTAATATTCCTCCTACAATATGGACTTGGCTTCTTTGTGATGATTATTTGGTTCCACTTTAGATGGGTTCCTTTCCACTTGGTGCTGTGGGAGTCTCGAAGGATTGGGTACGCCAATTATACATGCTCTTTGTTACTTGTGTAAAACATGGTGCCTTGGAGCCAATGGTGTGACATGTATGATGATTCCACTCGTTTTAACCACCCCTACCTTCTCTTCTGGTTTGACAATGTTGAAATCAAAACTGTTTAGTGCAGTCAGAATATGTTTATCAAAGTGCGAATATTTTGTAGTTCGTATCCTGGACACTGTTTTGGTCATTCTATCCAACAGGGCTACCCTCTCTCTAATGGCTACTTACTGCGGGATGCTGACTACATTTTAATAGTTTGTCTCGTAGCATGAGCCTGTAAGATATGCTGGTGGTTCTGGAGGTATGCAGAAAGAGGATGTTGTCTTTGTGGGTGCATCATAAGGGAACTTACGTGACTGAGTGCTAGGAAGTACAAGTGGCAGGTTTGTTGTGTCGTTAGACTTGCAATGCGAGTGCTTGGAATAGGATGTGATTGCCATTAAAAATTAAAAGAAAATGGTGGAAAGCATGTTTTATCAATGCAGCACTTCGTTGTGTCATTGGAGCCATTCCAGGGTCAGTGACTTAGGCTATACTTTATTAGAAGGGGCTAGCTGGAAATGGCTTATCTAGATATTTGACTCGACCCATGGTTTTTCAGCTGTGGCAGCTGCCCTATGTTCAGTTTCTGTAGAGAATCTCGCAACGGTTGGCTGTTTCTTTGAAAACTAGGAGATGGGTATGCCGCCAAAGTAGATGATGTATGCTAATGTTGAGGTTCTGTCATCAAGTTGCCACCCCAATCCGCGTTGATGGTGTGTTTAATATATTGTGTATTGTAGACGCTTGAGGTGTTGGAGATGAAGATTGGTGGGTTTATGCATAAAGTGAGAGAGCTTATTAGTGGAAACTGGCAACACTAGTTGCAGTGCCATCATGCAATTATAGTTTAGCGGAACAAGAGAGAGGTGTGGGTGCAGGTTTTGCCCCTTCCATCTCAAACTTTTCCAAGATCTCATGAATGTATCTATGTTGAGACAGGAAGGGACTAGACTTGCATGGGATGAACTTGATGCCAAGGAAGTGGTGAGGGTTACCCACTTTTTTACTCAGTGAACGTGTGAGATAGTGTAGTAATAAAATTCATAAAGAATGACATTGTTGTTGCCAGTAGGCAGTATATAATCTGCATCCACATTGAGTGATTTGAACGTGAGGGGTTGAATTCTGATTTTATTAATTTTACAGA 4336 0.4555 MGNCCRSPAAVAREDVKSSFSNADHHGKSAAAAAKQKAPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDVEDVRREVAIMRHLPESPSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPEVDLYMPPSELVMVDRDAMMGVCVTRTAESAGYDDGNCLKLWHFLGCERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAKSEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDNDNDGIVSIEELKVGLRNFGSQLAESEVQLLIEAVDSNGKGTLDYGEFVAISLHLKRMANDDHLHKAFSYFDKDGNGYIEPDELRNALMEDGADDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKWVPFHLVLWESLKDWVRQLYMLFVTCVKHGALEPMHEPVRYAGGSGGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDNDNDGIVSIEELKVDSNGKGTLDYGEFVAISLHLKRMANDDHLHKAFSYFDKDGNGYIEPDELRNALMEDGADDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02082 908 CDD STKc_CAMK 54 358 - -
Pste5g02082 908 SMART serkin_6 55 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02082 908 FunFam Calcium-dependent protein kinase 7 658 720 - -
Pste5g02082 908 Pfam Protein kinase domain 611 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02082 908 Pfam Protein kinase domain 57 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02082 908 Gene3D - 784 801 - -
Pste5g02082 908 SUPERFAMILY Protein kinase-like (PK-like) 53 360 IPR011009 -
Pste5g02082 908 FunFam Calcium-dependent protein kinase 7 368 543 - -
Pste5g02082 908 Gene3D Transferase(Phosphotransferase) domain 1 598 719 - -
Pste5g02082 908 Gene3D Phosphorylase Kinase; domain 1 56 140 - -
Pste5g02082 908 ProSitePatterns EF-hand calcium-binding domain. 820 832 IPR018247 -
Pste5g02082 908 ProSitePatterns EF-hand calcium-binding domain. 769 781 IPR018247 -
Pste5g02082 908 CDD EFh 760 837 IPR002048 GO:0005509
Pste5g02082 908 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Pste5g02082 908 SUPERFAMILY EF-hand 388 567 IPR011992 -
Pste5g02082 908 ProSitePatterns EF-hand calcium-binding domain. 856 868 IPR018247 -
Pste5g02082 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Pste5g02082 908 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Pste5g02082 908 CDD EFh 811 873 IPR002048 GO:0005509
Pste5g02082 908 ProSiteProfiles EF-hand calcium-binding domain profile. 807 842 IPR002048 GO:0005509
Pste5g02082 908 ProSiteProfiles Protein kinase domain profile. 55 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02082 908 SUPERFAMILY Protein kinase-like (PK-like) 611 738 IPR011009 -
Pste5g02082 908 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Pste5g02082 908 Pfam EF-hand domain pair 810 873 IPR002048 GO:0005509
Pste5g02082 908 Pfam EF-hand domain pair 405 466 IPR002048 GO:0005509
Pste5g02082 908 Pfam EF-hand domain pair 477 540 IPR002048 GO:0005509
Pste5g02082 908 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Pste5g02082 908 FunFam Calmodulin A 781 875 - -
Pste5g02082 908 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 535 - -
Pste5g02082 908 Pfam EF hand 761 782 IPR002048 GO:0005509
Pste5g02082 908 ProSitePatterns EF-hand calcium-binding domain. 523 535 IPR018247 -
Pste5g02082 908 Gene3D - 802 872 - -
Pste5g02082 908 Gene3D - 739 753 - -
Pste5g02082 908 ProSiteProfiles Protein kinase domain profile. 359 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02082 908 FunFam Calcium-dependent protein kinase 1 57 140 - -
Pste5g02082 908 Gene3D - 368 543 - -
Pste5g02082 908 SMART efh_1 811 839 IPR002048 GO:0005509
Pste5g02082 908 SMART efh_1 406 434 IPR002048 GO:0005509
Pste5g02082 908 SMART efh_1 442 470 IPR002048 GO:0005509
Pste5g02082 908 SMART efh_1 514 542 IPR002048 GO:0005509
Pste5g02082 908 SMART efh_1 760 788 IPR002048 GO:0005509
Pste5g02082 908 SMART efh_1 847 875 IPR002048 GO:0005509
Pste5g02082 908 SMART efh_1 478 506 IPR002048 GO:0005509
Pste5g02082 908 CDD EFh 478 540 IPR002048 GO:0005509
Pste5g02082 908 Gene3D Transferase(Phosphotransferase) domain 1 141 367 - -
Pste5g02082 908 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Pste5g02082 908 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Pste5g02082 908 SUPERFAMILY EF-hand 742 899 IPR011992 -
Pste5g02082 908 ProSiteProfiles EF-hand calcium-binding domain profile. 756 791 IPR002048 GO:0005509
Pste5g02082 908 ProSiteProfiles EF-hand calcium-binding domain profile. 843 878 IPR002048 GO:0005509
Pste5g02082 908 Gene3D - 730 782 - -
Pste5g02082 908 ProSiteProfiles EF-hand calcium-binding domain profile. 510 545 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02082 Pste-Chr5 13406863 13422242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02082 610 782 EF-hand Containing Proteins AT3G51850 92.486 5.23e-108 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste5g02082 Pkinase 4.9e-68 CL0016