Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02080 CAATTCACACCTGATGTTCACATTACACCCCCACCTACATATATATTCTTCCTCTCTTTTTCTCTCTCATCTTTCCCCCTCTCTCTCTCCTCCATAACCAAAACACACCCTTCAATATCATTCAGAGCCAGCCCCTCTCTTCTCTATTGGATTTTAGGTCATCATCTCCATCACCATCACCGGCAACAGCATCATCATCAACAACAACAACAACAGCATCACCATCCTCACAGCATCTCAACTAGTGCTAACGTGGAAGCCACGGATAGGTTCCCCCAATGGAGCATCCAGGAGACAAAAGAGTTCCTCGTGATCCGTGCCGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAGCTTTGGGAAGTCATCTCTAACCGGATGAAGGAAAAGGGTTACCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACGATGGAGCCCGAGGCTATGAGGCAGCAATTCCCGTTCTACAATGAGCTTCAAACGATTTTCACAGCGAGGATGCAGAGAATGTTGTGGGCTGAAGCAGAAGGCGGGTCAAAGAAGAAGGGGGTGCACCTTTCTTCTGATGAAGAGGAAGAAGGTAATGAAGAGAGCGAGGGAGATCACAAGAGTAGCATGAGCAGGAAGAAGAAGAAGGGCAAGATGGTAATTGGTGGAGGGAGTGGCAACACTGGTAATTTAGAGAGTTTGAAGGAGATAATGGAAGAGTTCATGAGGCAGCAGATACAAATGGAGGCACAGTGGATGGAAGCATTTGAGGCAAGGGAGAGTGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCATTGGAGAATGAGAGGATAATGATGGATCAAAGATGGAGAGAGAGGGAAGAACAAAGAAGGATTAGAGAAGAAGTTAGGGCTGACAAGAGAGATGCTCTAATCACAGCTCTTCTGAACAAACTCAGAAGAGAAGAGATAGATTCTATTCGAGTAGTAGGTGTTGATAGAGAGAGAAATATATATAAAAGAGCACAATTTGTAGTTCCTAAC 1071 0.4547 QFTPDVHITPPPTYIFFLSFSLSSFPLSLSSITKTHPSISFRASPSLLYWILGHHLHHHHRQQHHHQQQQQQHHHPHSISTSANVEATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQTIFTARMQRMLWAEAEGGSKKKGVHLSSDEEEEGNEESEGDHKSSMSRKKKKGKMVIGGGSGNTGNLESLKEIMEEFMRQQIQMEAQWMEAFEARESERRLKEMEWRQTMEALENERIMMDQRWREREEQRRIREEVRADKRDALITALLNKLRREEIDSIRVVGVDRERNIYKRAQFVVPN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02080 357 Pfam Myb/SANT-like DNA-binding domain 93 176 IPR044822 -
Pste5g02080 357 MobiDBLite consensus disorder prediction 193 242 - -
Pste5g02080 357 FunFam Zinc finger and SCAN domain-containing 20 94 155 - -
Pste5g02080 357 CDD GT1 92 157 - -
Pste5g02080 357 MobiDBLite consensus disorder prediction 60 82 - -
Pste5g02080 357 Coils Coil 242 262 - -
Pste5g02080 357 ProSiteProfiles Myb-like domain profile. 94 150 IPR001005 -
Pste5g02080 357 PANTHER FI21293P1 59 330 - -
Pste5g02080 357 Gene3D - 94 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02080 Pste-Chr5 13369904 13371802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02080 89 334 Trihelix Transcription Factor Family AT5G01380 54.779 2.04e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste5g02080 Myb_DNA-bind_4 5.4e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02080 5 13369904 13371802 Pste5g02080 5 13369904 13371802 ECH