Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02075 AACATGTCACAGCCTGTCACCAAATAGGATTCTTTCTTTTCCGGCTTGGTGTTTTTGAAAAACTTGATTCCTGTCATTTTTGGAAGTATTGAGCAAAATTTGTAAACAGGAAAATAGAAAATAACCGGAAACCGGACACAGCCGGTGGAAGCCGAGGCAGGTTGGTCTTGAGAGACGATATATAAGAAGCGAGGAAGCGAAAACCAGTAGCAGAGAAACAGAGAGTGGTCTGAGTCGAGAGAGGGAGTGATCCTTGATCATCATCGTAGATTGAAGATGCCGATCAGAAACATCGCCATAGGAAGGCCCGAAGAGGCAACTAACCCGGACACGTTGAAGGCTGGGTTGGCTGAGTTCATCTCCACCCTCATCTTCGTGTTCGCCGGTTCCGGTTCCAGCATCGCCTACAACAAGCTCACCAACAACGGCGCCGCCACCCCCGCCGGACTCATCGCCGCCTCCATCGCCCACGCATTCGGTCTCTTTGTAGCGGTCGCCGTCGGGGCCAACATCTCCGGCGGCCACGTCAACCCCGCTGTCACCTTCGGCGCCTTCGTCGGCGGCAACATCACCTTCCTCCGCGGCGTCGTCTACGTCATCGCCCAGCTCCTGGGCTCCGTCGTCGCCTCCCTCCTCCTCGCCTTCGTCACCTCCTCGACCGTTCCAGCATTCGGGCTGTCCGCTGGAGTTGGAGTTGGGAACGCTTTGGTGTTGGAGATCGTGATGACCTTCGGTTTGGTTTACACAGTGTACGCAACTGCCGTTGATCCCAAGAAGGGCAATTTGGGAATTATTGCTCCCATTGCAATTGGTTTCATTGTTGGCGCTAACATTTTGTTGGGTGGGGCCTTCTCTGGAGCAGCCATGAACCCTGCCGTTACATTTGGGCCTGCCGTCGTCAGCTGGACCTGGACCAACAACTGGATCTACTGGGTTGGGCCCCTCGTTGGTGGTGGCCTTGCTGGAGTCGTCTACGAGGTCGTCTTCATCAGCCACACCCACGAGGCCCTCCCCTCCACTGACTACTAGATTCCAAAATTCAAAATAAAAACCAAAACAAATTTGTGTATTATTGAATTTCTCTGTCTATGCTTTTTCTTCCTTGTGTTTCTTTTTCTTCTTCGAGGGTTGTTCCTTGTGTTGAATCGGTGCCCGTTGGATGGTTGATGATCATGACGTTCTCTTTAAGTTAAATTATTGTCATTTGTGCATTCTCTCACTCTCACTCTCACTCTCACTCTCACTCTCTCACTTGGTCCACCATTGAATTCAATGTATCATCATTATTAGGGACTGCTTTCCTGTACTGTTTCACGTTTTAACCAGTACATCTTTCTTTGTCCTGCGTGGTACTCTCTTAATTAATTAAGATTAAAATTGAATTGATTCTCA 1392 0.5 MPIRNIAIGRPEEATNPDTLKAGLAEFISTLIFVFAGSGSSIAYNKLTNNGAATPAGLIAASIAHAFGLFVAVAVGANISGGHVNPAVTFGAFVGGNITFLRGVVYVIAQLLGSVVASLLLAFVTSSTVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGNLGIIAPIAIGFIVGANILLGGAFSGAAMNPAVTFGPAVVSWTWTNNWIYWVGPLVGGGLAGVVYEVVFISHTHEALPSTDY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02075 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pste5g02075 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Pste5g02075 250 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Pste5g02075 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 FunFam Probable aquaporin TIP1-1 4 250 - -
Pste5g02075 250 PANTHER AQUAPORIN-8 6 245 IPR034294 -
Pste5g02075 250 Pfam Major intrinsic protein 15 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g02075 250 ProSitePatterns MIP family signature. 196 204 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02075 Pste-Chr5 13338898 13340388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02075 1 250 Major Intrinsic Protein MIP AT2G36830 80.478 2.19e-142 397
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02075 5 13338898 13340388 Pste5g02075 5 13338898 13340388 ECH
Pste5g02075 5 13338898 13340388 Pste4g02173 4 15792373 15792950 PCT