Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02063 GTACCACCATCCAGCAAACTCCAATTCCTCATTAAAATGAAGCCTTTTTCTCTCCTGTTACTTGCATTCTGTTCTGTATATTTCCACCTTTTGTGTTCCTTTACAATAAACTCAGTATGGTTCTCCCCAAAACTGAGTGCCTTTGCATCAGATAATAATGAGACCGATCATTTGGCATTGCTCAAATTCAAAAATCTATATCCATTGATCCATATGGAATTTTCTTTTCTTGGAATAGTTCTTCTCACTTCTGTAATTGGCATGGAATCACATAGATTCATATCTCCTCATGTAGGAAATCTCTCTTATATGAGAAACTTGAGTCTCTCAAACAACTTCTTTGGGAAAATACCACAAGAATTGGCACGGTTGTCACAACTGGAGTACCTCTCTATCACAAATAACTCATTGGTAGAAGAAATTCCTGCAAACTTAACAAATTGCACTAATCTCAAAGGCTTGGAGTTAGGTGAGAACAATTTGATTGGTAAAATACCAATTGAAATTGGTTTACTCCGAAAGCTTCAATATTTCTATGTTTATCATAATGAGTTAACTGGAGAAATTCCGTCATCCATAGGAAATCTTTCATCGTTAACTCTTCTCTTAGTGAGTGATAATCACTTCAAAGGAAAAATTCCACGAGAAATATGTCATCTTAAAAGCTTGACTTATCTTTCACTCACTTCCAACAAATTCAGTGGAACACTTCCTTCTTGTCTTTATAATATGTCATCTCTTACTACTCTCGTAGTTGGAGATAATCATTTAAACGGGTCTCTTCCATCTAGCATGTTCCATACTCTACCTAATCTCCAATCATTTTATATTGGTATGAATCAAATCTCAAGTACAATCCCACCTTCTATTATTAATGCATCTACCCTCTTATTAGTTAGTATTCAAAAAAATAATTTTGTGGGACAAGTTCCGAGTTTTGGAAAGCTACAAGATATTCAATATCTAGCTTTTTCTGACAACAGCCTAGGAGGAAATTCAACAAATATTTTACAGTTTTTAAAACAAATTGTACTGTTTCAAACCTTAGATATAGCCTTTAATAATTTTGGAGGTCATTTGCCAAATTCTTTGGGCAATTTATCCTCCCAACTTAGTGGATTATATCTAGGAGGTAATAAGATATATGGAGAAATCACTACATCAATAGGAAATCTCATTGAGTTAGTTGTCTTCACGATGTCAGAAACCTATGTGGGAGGGATTATACCAACTATTGGGAAGCTGCAAAAGATGCAAGTGTTGGACTTGGGAGAAAACAAGTTGTCAAGAGAGATAGAGGGCTTCATAAGCAACCTTAGTCAATTATTCTATTTTGATATGGGAAAAAATATGTTAGAAGGAAATATTCCTTCAAGTATAGGAAATTGCCAAAAACTACAACGCTTAAACCTTGGGCAAAACAACTTTATTGGAACCATTCCATTAGAGATTTTTAATATTTTCTCCTTAACAATCTTGCTAGACTTGTCTCAAAAATCATTGAGTGGTAGCATACCGAAAGAAGTGGGCAACCTAAAAATTATCAATGAGCTAGATATATCTGAGAATCATCTGTCTGGTGACATTCCTAGAACCATTGGAGAATGCATAATGTTGGAATCTCTCACGAAATCACTTGTTTGGATGGTACCAACTGAAGGTGTGTTTTGGAATGCAAGTGGACTAGGTGTTACTGGGAATAGTAAGCTTTGTGGAGGTATTTCAAAACTACATCTACCACCATGCTCAATAAAAGATGAGGAATTTGCAAAAGACCATAAGTTCAAGCGGATAGTAGTGCTAGTTAGGGTGGTTGCTTTTGTTCTCATACTGTTAATTATTTTAATTATGTATTGGGTGAGGAAAAGGACTAAGAAACCATCTTTGGAGTCACCAACCATTGACCTGTTGACTAAAGTTTCATACCAAAGCCTATATAATGGAACCAACGGGTTCTCAACTGCAAATTTGATAGGATCTGGATATTTTAGCTTTGTCTATAAAGGAACTCTCCAATTAGAAGACAAATTTGTTGCTATAAAAGTCCTAAACCTTCAAACAAAAGGAGCTCACAAAATTTTATTAATGGAAGCTTGGAGAAATGGTTGCATCCAAGGGCATCAACTACAGAGCATCAAAGAACCCCTGAACCTTGATCAAAGATTAAATATCCTGATTGATGTTGCTTATCTGTTCCAATATCTTCATCATGAATGTGAGGCTTCAATAATTCATTGTGATTTAAAGACAAGAAATGTACTTCTTGATGATGACATGATTGCTTGTGTGAGTGATTTTGGCATCACAAGACTTCTCTCAGCCATCAATGACACAACTTCTAAGCAAACAAGTACAATTGCAATAAAGGGAACTATTGGTTATGCTCCTCCGGAGTATGGACTAGGTTCCGAGGTGTCTACAAATGGTGATATGTATAGTTTTGGTATTTTGGTGTTAGAGATGCTTATTAGAAGAAGACCTACAGATGAAATCTTTGAAGATGGTCAAAATTTGCATCGCTTTGTGGATAATTCATTTCCTAATAATCTTTTGCAAATTTTGGATCCATTACTTATACCAAAACATGACCAGGCAACAATTGAAGGAGAAAATATTCAAAATCTAATTCCAATGTTTGAGAAGTGTTTAGTTTCATTGTTTAATATTGGACTTGCTTGTTCAATGAAATCACCTAAAGAAAGAATGAATATGATAGATGTCACTAGAGAGTTGAGCATT 2739 0.3498 VPPSSKLQFLIKMKPFSLLLLAFCSVYFHLLCSFTINSVWFSPKLSAFASDNNETDHLALLKFKNLYPLIHMEFSFLGIVLLTSVIGMESHRFISPHVGNLSYMRNLSLSNNFFGKIPQELARLSQLEYLSITNNSLVEEIPANLTNCTNLKGLELGENNLIGKIPIEIGLLRKLQYFYVYHNELTGEIPSSIGNLSSLTLLLVSDNHFKGKIPREICHLKSLTYLSLTSNKFSGTLPSCLYNMSSLTTLVVGDNHLNGSLPSSMFHTLPNLQSFYIGMNQISSTIPPSIINASTLLLVSIQKNNFVGQVPSFGKLQDIQYLAFSDNSLGGNSTNILQFLKQIVLFQTLDIAFNNFGGHLPNSLGNLSSQLSGLYLGGNKIYGEITTSIGNLIELVVFTMSETYVGGIIPTIGKLQKMQVLDLGENKLSREIEGFISNLSQLFYFDMGKNMLEGNIPSSIGNCQKLQRLNLGQNNFIGTIPLEIFNIFSLTILLDLSQKSLSGSIPKEVGNLKIINELDISENHLSGDIPRTIGECIMLESLTKSLVWMVPTEGVFWNASGLGVTGNSKLCGGISKLHLPPCSIKDEEFAKDHKFKRIVVLVRVVAFVLILLIILIMYWVRKRTKKPSLESPTIDLLTKVSYQSLYNGTNGFSTANLIGSGYFSFVYKGTLQLEDKFVAIKVLNLQTKGAHKILLMEAWRNGCIQGHQLQSIKEPLNLDQRLNILIDVAYLFQYLHHECEASIIHCDLKTRNVLLDDDMIACVSDFGITRLLSAINDTTSKQTSTIAIKGTIGYAPPEYGLGSEVSTNGDMYSFGILVLEMLIRRRPTDEIFEDGQNLHRFVDNSFPNNLLQILDPLLIPKHDQATIEGENIQNLIPMFEKCLVSLFNIGLACSMKSPKERMNMIDVTRELSI 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02063 913 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Pste5g02063 913 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 270 - -
Pste5g02063 913 SUPERFAMILY L domain-like 55 329 - -
Pste5g02063 913 SMART LRR_typ_2 244 268 IPR003591 -
Pste5g02063 913 SMART LRR_typ_2 124 148 IPR003591 -
Pste5g02063 913 SMART LRR_typ_2 415 439 IPR003591 -
Pste5g02063 913 SMART LRR_typ_2 269 293 IPR003591 -
Pste5g02063 913 SMART LRR_typ_2 172 196 IPR003591 -
Pste5g02063 913 SMART LRR_typ_2 220 243 IPR003591 -
Pste5g02063 913 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 95 189 - -
Pste5g02063 913 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 332 586 - -
Pste5g02063 913 Pfam Leucine rich repeat 173 233 IPR001611 GO:0005515
Pste5g02063 913 SUPERFAMILY RNI-like 286 545 - -
Pste5g02063 913 Gene3D Ribonuclease Inhibitor 218 335 IPR032675 -
Pste5g02063 913 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 700 913 - -
Pste5g02063 913 Gene3D Phosphorylase Kinase; domain 1 617 702 - -
Pste5g02063 913 SMART LRR_sd22_2 172 198 - -
Pste5g02063 913 SMART LRR_sd22_2 269 295 - -
Pste5g02063 913 SMART LRR_sd22_2 415 441 - -
Pste5g02063 913 SMART LRR_sd22_2 368 394 - -
Pste5g02063 913 SMART LRR_sd22_2 124 143 - -
Pste5g02063 913 SMART LRR_sd22_2 220 246 - -
Pste5g02063 913 Gene3D Transferase(Phosphotransferase) domain 1 703 913 - -
Pste5g02063 913 SMART serkin_6 652 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02063 913 SUPERFAMILY Protein kinase-like (PK-like) 626 911 IPR011009 -
Pste5g02063 913 Gene3D Ribonuclease Inhibitor 336 590 IPR032675 -
Pste5g02063 913 Pfam Protein tyrosine and serine/threonine kinase 681 827 IPR001245 GO:0004672|GO:0006468
Pste5g02063 913 ProSitePatterns Protein kinases ATP-binding region signature. 658 681 IPR017441 GO:0005524
Pste5g02063 913 ProSiteProfiles Protein kinase domain profile. 652 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02063 913 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 269 912 - -
Pste5g02063 913 Gene3D Ribonuclease Inhibitor 49 217 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02063 Pste-Chr5 13275868 13278975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02063 94 911 Receptor kinase-like Gene Family AT3G47570 38.203 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste5g02063 PK_Tyr_Ser-Thr 2.4e-20 CL0016