Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02038 CGACAAGAGGAAACTGTTTCTTTTGTCTTGCCTCAAATTCTGGTCTTAAAATCCAGTTTCCAAGACAAATGTACAGGGATATGAGGATGGAAGAAGAGAAACATGACTCAGAATGTTCCAAGATAAACCCTTCTAACGAAGAAGGTTATGAAGAAAGTGAGGGCAACGAAGATGAAAGTAAGCAAAACAACAGTGGGGGAAGTTCAAGCAACAGCACTGTTGAAGAAAACGAGAAGAAGACATCAGTGAGGCCTTATGTTAGATCCAAGTTGCCCAGGCTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTAGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTGCAGATGTACAGGAGCAAAAAGATAGACACAAATCAAGTATTGGGTGATGCTAGGCTCCTTGTAGAAACTGGAGATAGAAATCCAACTTTCCATGCTTCAAGGCTACAATCCAAGCCAAAATACAGATTACAGGCATACATTCTACTACCAACTTTCACTTCAAATTCTTTCAGATTAACATGCACAATTGCACAACTGAATGATATTCTGTCTTCTTTTTACAGATATGGATGTGGGAATGCCTCTCTTGGTATCTATGAGAGCATAGTGCATAGGCCTTTCATGGTTAAGAGTTCAGTAGATGAATCTGGTGCTGAATTTAGTGGTAGCAGATTGACTGAAAGGATACATAGGAACTATAGTAACATCAATTGGAGTTATACTATGTTCCAAGTTGTTCCTTCCAGTTTTAGTGAACCGTCGACAAGTAAGGTCCATGAACCGAAAGATAAGCTCTTCTCATTTGGTGGCACTGAATCCTTATGCAAAATGAGCCAGGTTGATCTACGTTCAACTCAAATGCAGCCAAGTTCACAAGCGCTCATACCTAACAATAAGGTGGAACTGAAGACCTTGAAAAGAAAGGCTTCAGATATTGACCTAGATTTGAATCTGTCACTTACATTAAATTCAAGGGTTGGTGGCGAGAACCAAGGAAGCATAGTGGACCCTGAAGTTGATAGCAATCTATCACTCTCTTTGTGTTCTCAATCCTCCTCCTTTAGCAGCAACAGGTTGAAAAAACCACAAGATCATTCTAAGGAGCAAGGGGAAAGAGCCAGTGCTCTGGATCTAACTATA 1220 0.4041 MYRDMRMEEEKHDSECSKINPSNEEGYEESEGNEDESKQNNSGGSSSNSTVEENEKKTSVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKIDTNQVLGDARLLVETGDRNPTFHASRLQSKPKYRLQAYILLPTFTSNSFRLTCTIAQLNDILSSFYRYGCGNASLGIYESIVHRPFMVKSSVDESGAEFSGSRLTERIHRNYSNINWSYTMFQVVPSSFSEPSTSKVHEPKDKLFSFGGTESLCKMSQVDLRSTQMQPSSQALIPNNKVELKTLKRKASDIDLDLNLSLTLNSRVGGENQGSIVDPEVDSNLSLSLCSQSSSFSSNRLKKPQDHSKEQGERASALDLTI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02038 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 125 IPR017930 -
Pste5g02038 384 Pfam Myb-like DNA-binding domain 71 121 IPR001005 -
Pste5g02038 384 MobiDBLite consensus disorder prediction 1 63 - -
Pste5g02038 384 MobiDBLite consensus disorder prediction 37 53 - -
Pste5g02038 384 Gene3D - 68 125 - -
Pste5g02038 384 FunFam Myb family transcription factor 67 125 - -
Pste5g02038 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 45 160 IPR046955 GO:0003700
Pste5g02038 384 SUPERFAMILY Homeodomain-like 68 123 IPR009057 -
Pste5g02038 384 MobiDBLite consensus disorder prediction 357 384 - -
Pste5g02038 384 MobiDBLite consensus disorder prediction 1 25 - -
Pste5g02038 384 NCBIfam myb-like DNA-binding domain, SHAQKYF class 69 124 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02038 Pste-Chr5 13036823 13038453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02038 59 126 G2-like Transcription Factor Family AT2G42660 79.412 5.68e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste5g02038 Myb_DNA-binding 1.1e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02038 5 13036823 13038453 Pste5g02038 5 13036823 13038453 ECH