Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02014 TGTGGATACAGGGTTTAAGCCTTTTGGGTCCAATCTAACGCTCAAAATCTCACCCTGTATTCCACACTCCGCCGCGCTTTGGTGACGCCGGAAGACACACTCAATTTTGCTCCTCAGTGGATACTCTCCGTTTTCCCGTTTTGGGAATAATTTCCTTCTCTTGTCGCTGCTATCGCTTTTTTGAGGTTGATAGGAGAAAATGAAGCAAGTAGTAGGAATGGTGGTTTCCAATAAGATGCAGAAATCGGTTGTGGTGGCAGTGGATAGACTTTTCTACCACAAAGTGTATGACCGTTATGTCAAGCGCACCTCTAAATTCGTGGCTCATGATGAGCACAACCTCTGTAATACTGGTGACCGAGTTCGACTGGATCCTTCTAGGCCTTTGAGCAAGCATAAACATTGGGTTGTTGCTGAAATTCTTAAGAAGGCACGGATATATGTTCCACCGTCCAACTCGATGTCTGATAATGTGAACTCCAGCTCTGAAGCACTTGCTTCATAAATAGGCTCAAGGTCTGAATGTATGAACTTAATTCTCCTTTTGACTGCATCCCATCATGATTTTTTTGCTGTTAAGAATTTATATTATTCCCCATACTTGTGGAAAAGGATACACTGTTATGGACATGTTTTCTGTTTTTGGCATCACATGTTTCTACAGGTTTCCTGTTTCCTTATTGCTCTTGTTTTTTGTACCATTC 704 0.4219 MKQVVGMVVSNKMQKSVVVAVDRLFYHKVYDRYVKRTSKFVAHDEHNLCNTGDRVRLDPSRPLSKHKHWVVAEILKKARIYVPPSNSMSDNVNSSSEALAS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02014 101 Gene3D - 1 98 IPR012340 -
Pste5g02014 101 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Pste5g02014 101 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste5g02014 101 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste5g02014 101 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste5g02014 101 FunFam 30S ribosomal protein S17 1 100 - -
Pste5g02014 101 NCBIfam 30S ribosomal protein S17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
Pste5g02014 101 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 83 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste5g02014 101 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste5g02014 101 SUPERFAMILY Nucleic acid-binding proteins 2 85 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02014 Pste-Chr5 12792245 12794245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02014 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 38.028 1.64e-06 42.4