Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02013 CCCACGATGCAAACTGTACATCATTTGAATAACAATAACAAGTGAAGAACAAATTCGAAATGCAATGATCTAATTTGAAGTTGTTACAGAAGGGAGCAAGATTCTTTGTTCCTCTGCCAAATCCCAATTGGCAATTGCTTCTCTTTCACTTCACTACACACTCTTGCCGTTACCAAGTCCTATCTTTCTCTCTCTGTCTCTGTCTCTCTGTTTTCTTTCTCAATCTTTTTGGCGGGAATTGGACCCCACCAAATTAAAATCTCGTCCTCTGCATAACCCTCCTCTCATAAATACAACTACTTCCTTTTCTTTCTTACCCCTCAACTAAACCATCTTCTACGCCTTCACTCTCCCAACACTGCACATAACCAAACGCACCGTAACATTACCGCGTTTCTTTCTCTTCGAAAACGGTGCGTGTTATCTCTCATTCTAAATGACCGTTACTCTCTTCATCCTTGTTTTCTTCTTCTTTTTCCATCCAGCACTTTCTCTCTCCTCCGACGGCGTTGCGCTTCTCACTCTAAAGTCCGCCGTCGACGCCTCCACCGCCACCGCCTTCTCCGACTGGAACGACTCCGACGCCACGCCGTGCCGCTGGTCCGGCATCACGTGCGCCAACATCTCCGGCCTCCCGGAGCCCCGCGTCGTTGGCGTCGCGCTCTCCGGCAAGGGCCTCCGCGGCTACCTCCCGTCGGAGCTCGGCACGCTCCTCTACCTCCGCCGCCTCAACCTCCACACCAACGCTTTCCGTGGCGCCATTCCGTCGCAGCTCTTCAACGCCACCGCGCTCCACAGCGTCTTCCTCCACGGCAACAACCTCTCCGGCAACCTCCCTCCCTCCGTCTGCAACCTCCCCCGACTCGAAAACCTCGACCTCTCCGACAACGCCCTCTCCGGCGCCATCCCCGATACGCTCCGAAAATGTTCCCAGCTCCAGCGGTTGATCCTCGCACGGAACAAATTCTCCGGCCATATTCCGGCGAGTCCGTGGCCGGAGCTGGAAAAATTGGTCCAGCTCGACCTGTCATCGAACCTTCTAGAAGGTTCTATCCCGGAACAACTTGGCGAACTTAAAACCCTTACCGGAACCCTAAACCTCTCTTTCAATCACTTATCTGGTAAAATTCCCAAATCTCTCGGGAATTTGCCTGTTGCCGTGAGTTTTGATCTTCGGAGCAATGATTTGAGCGGTGAGATTCCCCAAACAGGGTCGTTTTCGAACCAGGGCCCCACCGCGTTCCTCAACAACCCGAACTTGTGCGGGTTTCCTCTGCAGAAACCCTGCACAGGTTCAGCACCGAGTGAACCGGGGCTCGGTCCTAGTTCTCGCGGATCGGTGCACCAGTCCGCGAAGGGCTTGAGTCCGGGTTTGATTATTTTGATTTCGGTGGCGGATGCTGCGGCGGTGGCTTTGATTGGGCTTGTGGTGGTTTATGTTTATTGGAAGAGGAAGGGGAAGTCCAATGGGTGTAGTTGCACTTTGAAGAGGAAGTTTGGTGGGGAAAGTGAGAAATTGAGTTTGTGTTGTTGGTGTAATGGGGTGAAGAGTGATGATTCTGAGATGGAGGAAGGGGAGAAGGGAGAGGGAGAGGGTGGGGGAGGGGAAGGGGAAGGGAATTTGGTGGCGATTGATAAGGGCTTTAACTTTGAGCTTGATGAGTTGTTGAGGGCTTCTGCTTATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAGGTGGTGCTTGGGAATGGGGTGCCAGTGGCTGTTAGGAGATTGGGGGAGGGTGGGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAGGCCATTGGCAAAGTAAAGCATCCCAACGTAGTCAAGTTGAGAGCATATTATTGGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCCAATGGAAATTTGGCCACTGCTCTTAGAGGGAGGAATGGTCAACCATCTCCGAATCTTTCATGGTCAACCAGGCTGAGGATCATCAAAGGAACAGCCAGGGGTTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACATCAAACCTTCCAACATCCTCCTTGACACAGAATTCCGACCCCACATTTCTGATTTTGGTCTAAACAGATTGATCAGCATTACAGGCAACAACCCCTCTTCTGGTGGTTTTATGGGAGGAGCTCTTCCTTACTTGAAGCCACCACAAACAGAGCGAACTAACAACTATAAAGCCCCTGAGGCTCGAGTTCCAGGTTGCAGACCCACCCAGAAATGGGATGTGTATTCATTTGGAGTTGTGTTACTTGAACTGCTTACTGGGAAATCTCCAGATGCTTCTCCAATTGCATCAACTTCCATGGAAGTCCCTGACTTGGTGAGGTGGGTTAGGAAAGGGTTTGAACAAGAAAGTCCATTATCTGAAATTGTTGATCCATCAATGCTCCATGAAGTGCATGCCAAGAAAGAGGTACTTGCTGTGTTTCATATAGCACTACAATGCACCGAGGGAGACCCTGAGATCAGGCCTAGAATGAAAACTGTCTCTGAAAATGTCGAAAAAATTGGATCATAAGATTCTAATGTTTACCAGCTGAAAGTAGTGCACCTGAGTCTGGAATTTCCGTGACACTGAAGGAAGATGCACTGCAGGCCCATAATGCAGTTTTTTGTTGTAGCACTCGGAAGATTTTCTTGTGGGGCATCAAGATGGTTTTGCAAATACTTCT 2720 0.4985 MTVTLFILVFFFFFHPALSLSSDGVALLTLKSAVDASTATAFSDWNDSDATPCRWSGITCANISGLPEPRVVGVALSGKGLRGYLPSELGTLLYLRRLNLHTNAFRGAIPSQLFNATALHSVFLHGNNLSGNLPPSVCNLPRLENLDLSDNALSGAIPDTLRKCSQLQRLILARNKFSGHIPASPWPELEKLVQLDLSSNLLEGSIPEQLGELKTLTGTLNLSFNHLSGKIPKSLGNLPVAVSFDLRSNDLSGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKPCTGSAPSEPGLGPSSRGSVHQSAKGLSPGLIILISVADAAAVALIGLVVVYVYWKRKGKSNGCSCTLKRKFGGESEKLSLCCWCNGVKSDDSEMEEGEKGEGEGGGGEGEGNLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNVVKLRAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLRIIKGTARGLAYLHECSPRKFVHGDIKPSNILLDTEFRPHISDFGLNRLISITGNNPSSGGFMGGALPYLKPPQTERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPDASPIASTSMEVPDLVRWVRKGFEQESPLSEIVDPSMLHEVHAKKEVLAVFHIALQCTEGDPEIRPRMKTVSENVEKIGS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02013 709 FunFam Leucine-rich repeat receptor-like protein kinase 395 487 - -
Pste5g02013 709 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 20 187 - -
Pste5g02013 709 Gene3D Ribonuclease Inhibitor 20 185 IPR032675 -
Pste5g02013 709 SUPERFAMILY L domain-like 21 281 - -
Pste5g02013 709 Pfam Protein kinase domain 417 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02013 709 FunFam Os07g0541700 protein 493 574 - -
Pste5g02013 709 ProSiteProfiles Protein kinase domain profile. 412 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02013 709 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Pste5g02013 709 Gene3D Phosphorylase Kinase; domain 1 401 487 - -
Pste5g02013 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 189 707 IPR046959 -
Pste5g02013 709 MobiDBLite consensus disorder prediction 373 393 - -
Pste5g02013 709 MobiDBLite consensus disorder prediction 373 388 - -
Pste5g02013 709 SMART serkin_6 416 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02013 709 PRINTS Leucine-rich repeat signature 143 156 - -
Pste5g02013 709 PRINTS Leucine-rich repeat signature 189 202 - -
Pste5g02013 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Pste5g02013 709 SUPERFAMILY Protein kinase-like (PK-like) 417 702 IPR011009 -
Pste5g02013 709 Gene3D Transferase(Phosphotransferase) domain 1 488 709 - -
Pste5g02013 709 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Pste5g02013 709 CDD STKc_IRAK 418 707 - -
Pste5g02013 709 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Pste5g02013 709 SMART LRR_typ_2 140 163 IPR003591 -
Pste5g02013 709 SMART LRR_typ_2 189 213 IPR003591 -
Pste5g02013 709 SMART LRR_typ_2 92 116 IPR003591 -
Pste5g02013 709 FunFam Leucine-rich repeat receptor-like protein kinase 191 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02013 Pste-Chr5 12783238 12788345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02013 16 707 Receptor kinase-like Gene Family AT1G67510 70.014 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste5g02013 Pkinase 3.2e-31 CL0016