Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02007 GAACGAAGAGCAAATAAAAAAGGAGCCCTTCGAGATGAAGAAAGCTTCTTGCAGGGAGAGGAAATCGCGGAAGAGACGCAGTGGTGGAAATGATTCTGTGGAATACACTCTTGAAAAATGGAAGGAGTACAACAGGCAGCAGCAACTGGGGTCCAGAGAAAATGGGGTGGAAGTGATTCACAAAGCTCCTGCAAAAGGGTCAAGAAAAGGGTGCATGAGAGGTAAGGGAGGGCCTCAGAACTCCGATTGCAAGTTCAGAGGTGTGAGGCAGAGGATTTGGGGTAAATGGGTTGCTGAGATTCGTGAACCTATCAATGGCAAGCTTGTGGGTGAGAAAGCAAATAGGCTTTGGCTCGGTACCTTCTCCACTGCACTTGAAGCTGCTCTTGCTTATGATGAAGCAGCTAAGGCCATGTATGGCCCTTGTGCTCGTTTGAATTTTCCCCAACATTCTACGGAGCCAATAGACTCCAATGGATCATCATCTAGTGGATCTGATAAAAAGTCACCAAGTGTTTCTTCAGAGAATGGTGATGATGTTACTAAAGCTGACGAGTTGGAGGGAAACATTCGTCAGTCTCATGCAGAGAAACCGAGATTTTCTAAGGACGGTGTCTTTGAGGAAAGAGAAGAGAAACCAGTTCATTCTGGAGGTTGTGTGGCTGATGATGACTCAATAGAGGAGTTGAAGGAAATTATAACAGATTTTGAACAGTGTCAAACAAGTGAAGATCGTAAGGCAATAACTTTGAAGAATGTCAAGGCTGAAGCACCTGGAGAAAGTGAAGGAATAGAAAGAGAAATGGAGGAGGTTCTGAAAAACTCTGGCATAGGTGAAGAGGGCAATCACTCGCAGAAGGAATCTATAAACACAGCCATGAATACAAGAGCTAACTATTGTAGCTCTTCTGATGCTGCTGAACTTAAGATTCTGGTAAAGAGTGAAGAAACAAGAGAAGAATCAGTTGAAACTTGGAAATCTTGTGAGTTGAGCTGCAGCAACCATTGCCTGGAGTATATGCATAATATGCTTCCAGACAGCAATCCAAGACCAAGTTCTGAACATTTTAGTAACATCCAAACTGAGGAATCTATTGCAAAGAAACATGCTGAGGAAGTGATTTCTGAATTCCTTGGACTATGTCACAGCAAGCACTTGAAGATTAACCATGGTCAGTCTCCACATGAGCAATATAGACGTGAACATTTTGACGAGATGAAGACTAAACTTAAGGATTTAGAAAGCAAGCTGAAAGCACATTCTATTCATTGCAAGAATAAGGCACCAATAGTAGGGGATTCCAATCATCCTTCTATGCATGGAATTCATCTGTTTGGTGGTAGCACTGTTGGACCAATTGAAAGTATGTCCCAAGTTGAGGCATTGAACAACATCAACACAAACAGAAATTCACTTACTGGATTTAGTACTGGGCATAGTAGGAAGTTTTGTGATCTTTCACAACAGCTACACAAACTTGGTTACCTGCCTGAGCATTGGAATAGTATGCAGTTTGCAGACTTGGAAGTTAGTTATGATTATAGTTTCTTAAATCCTGATTATGACTTTGGCTTATTGGAAGAGCGGAAGTTACTTGATATATGCTTTCCACAT 1615 0.4198 MKKASCRERKSRKRRSGGNDSVEYTLEKWKEYNRQQQLGSRENGVEVIHKAPAKGSRKGCMRGKGGPQNSDCKFRGVRQRIWGKWVAEIREPINGKLVGEKANRLWLGTFSTALEAALAYDEAAKAMYGPCARLNFPQHSTEPIDSNGSSSSGSDKKSPSVSSENGDDVTKADELEGNIRQSHAEKPRFSKDGVFEEREEKPVHSGGCVADDDSIEELKEIITDFEQCQTSEDRKAITLKNVKAEAPGESEGIEREMEEVLKNSGIGEEGNHSQKESINTAMNTRANYCSSSDAAELKILVKSEETREESVETWKSCELSCSNHCLEYMHNMLPDSNPRPSSEHFSNIQTEESIAKKHAEEVISEFLGLCHSKHLKINHGQSPHEQYRREHFDEMKTKLKDLESKLKAHSIHCKNKAPIVGDSNHPSMHGIHLFGGSTVGPIESMSQVEALNNINTNRNSLTGFSTGHSRKFCDLSQQLHKLGYLPEHWNSMQFADLEVSYDYSFLNPDYDFGLLEERKLLDICFPH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02007 527 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 331 - -
Pste5g02007 527 MobiDBLite consensus disorder prediction 167 211 - -
Pste5g02007 527 MobiDBLite consensus disorder prediction 139 166 - -
Pste5g02007 527 Pfam AP2 domain 72 129 IPR001471 GO:0003700|GO:0006355
Pste5g02007 527 MobiDBLite consensus disorder prediction 1 20 - -
Pste5g02007 527 MobiDBLite consensus disorder prediction 138 211 - -
Pste5g02007 527 CDD AP2 72 139 IPR001471 GO:0003700|GO:0006355
Pste5g02007 527 Gene3D AP2/ERF domain 72 139 IPR036955 GO:0003700|GO:0006355
Pste5g02007 527 SUPERFAMILY DNA-binding domain 73 138 IPR016177 GO:0003677
Pste5g02007 527 SMART rav1_2 73 143 IPR001471 GO:0003700|GO:0006355
Pste5g02007 527 ProSiteProfiles AP2/ERF domain profile. 73 137 IPR001471 GO:0003700|GO:0006355
Pste5g02007 527 FunFam Ethylene-responsive transcription factor 2 72 138 - -
Pste5g02007 527 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Pste5g02007 527 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Pste5g02007 527 MobiDBLite consensus disorder prediction 52 71 - -
Pste5g02007 527 Coils Coil 392 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02007 Pste-Chr5 12759651 12762065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02007 1 163 AP2-EREBP Transcription Factor Family AT2G40340 51.786 7.42e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste5g02007 AP2 4.4e-14 CL0081