Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01995 ATGAAGAAGATAAAAGGTTAAAAAGCAACCTGTTTACAGTTTTGAAGTTGCATTGTTCTTCCCTTGGATCCGGGGAAATGCTACCAAGATTCTTGTTTAATGGCCATCTCTGGCTTTGGTAGTTTCCTTTGGCTTTATGGTTCTAATAATGAAAGAATTGAGTTACTCCAGGTCTCGATCCTATGCTCTTTATTATAGCATGATGCTTTTTAAACATGTGGCTTTGATTAATGTTGGATATGGTACATTAATAGGACTTCACTGGAGAAAAAGATGTGATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAATTTATTCGTGACAATCTACCCTCAAAACTGTCTACAGCAATCGAAATTTCACAACAGAAGACAATTAAGTATTATGATGCAAATGATTCTGAAACTGCTAGTTTTAATGATGACTACGATGATAGTAACCCCAACATGTCACTTGCTTCATGGGAGGGATGCCTTCTGAAGTCTTTTGATGAGATGGATGAGCACCTTGCTCAGGAAATTAACACTGACAGTTATTGCAGTGGTTGCACCGCTGTGACTTTAATTAAACAGGGTGACCAGTTGATAGTTGGCAATTTGGGTGACTCTCGTGCTGTTCTTTGCACAAGGGATAGCGACCAACTCATTCCAGTTCAACTCACTGTTGACTTGAAACCAGATATTCCAAGTGAAACTTCAAGAATAGTTAATTGTGAAGGAAGAGTTTTTGCAGCAGAAGAAGAACCAGATGTGTACAGAATATGGATGCCTGATGACGACTGCCCTGGACTAGCCATGTCAAGAGCCTTTGGGGACTTTTGCCTCAAAGATTATGGCCTCATTGCAGTTCCTGATGTATTTTACAGAAGAATTACACCACAAGATGAATTTGTGGTTTTGGCAACTGATGGGGTATGGGATGTGCTCTCTAACATTGAAGTGATAAACATAGTTGCTTCAGCACCAAGGAGGTCAACAGCAGCCAAGTTGTTAGTAAAGCGTGCCGTTAGAGCCTGGAGATACAAGTATCCTGGTTCCAAGGTTGATGACTGTGCTGCAATATGCCTGTTTTTGGATGAAAAATCTGTTCTATCCCATTCGCAATCCCATATGAATAGAAAAACCAGACAGCGTCGCTCTAAATCCACTAGAAATGAAGACACTGAAACTGTAGATGGCAAGGTTGGGATGGAACTAGAAGAAGAATGGAAAGCACTGGGAGGGTTTACTAGAGCCAACTCTTTATCAAAACTTCCACGCGTTGCTAGGGGTATGAGTAAACAGCAATCATCTAAGTACTATACACCAAGTTGAAGTTCACTGACAAAGGGCCTCTGAGAACTTAATAAGGGGTCAAAATACTCATATTGGACCTCAAGTTGTATATTTAGGAGGGGTTGAAGATTTTAGGATATTATGTTTCCCTTAAAATGAGTGTAAAAATTAGAATGATGAGCTTTATATGAAAAGTTATACTTAACATTTACTCAATATTAAGAATATACCAAACTGCATATACCTCAAAAGATGTAATGGTTCCTTCTGAAAAC 1570 0.3943 MSLASWEGCLLKSFDEMDEHLAQEINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCTRDSDQLIPVQLTVDLKPDIPSETSRIVNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIAVPDVFYRRITPQDEFVVLATDGVWDVLSNIEVINIVASAPRRSTAAKLLVKRAVRAWRYKYPGSKVDDCAAICLFLDEKSVLSHSQSHMNRKTRQRRSKSTRNEDTETVDGKVGMELEEEWKALGGFTRANSLSKLPRVARGMSKQQSSKYYTPS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01995 288 Pfam Protein phosphatase 2C 7 187 IPR001932 -
Pste5g01995 288 ProSiteProfiles PPM-type phosphatase domain profile. 1 209 IPR001932 -
Pste5g01995 288 SUPERFAMILY PP2C-like 4 210 IPR036457 -
Pste5g01995 288 SMART PP2C_4 1 207 IPR001932 -
Pste5g01995 288 PANTHER PROTEIN PHOSPHATASE 5 207 IPR015655 GO:0004722|GO:0006470
Pste5g01995 288 MobiDBLite consensus disorder prediction 268 288 - -
Pste5g01995 288 MobiDBLite consensus disorder prediction 274 288 - -
Pste5g01995 288 MobiDBLite consensus disorder prediction 219 245 - -
Pste5g01995 288 CDD PP2Cc 5 209 IPR001932 -
Pste5g01995 288 MobiDBLite consensus disorder prediction 231 245 - -
Pste5g01995 288 Gene3D - 2 212 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01995 Pste-Chr5 12680000 12682138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01995 10 275 PP2C-type Phosphatase Gene Family AT1G79630 52.542 1.05e-101 304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01995 5 12680000 12682138 Pste5g01995 5 12680000 12682138 ECH
Pste5g01995 5 12680000 12682138 Pste6g00453 6 1702165 1703294 PCT