Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01989 GTCGGGTGGAGATTCAAAACTCTCTCTCTCTCTATCTCAATGAATGTCTCCAAACTTTTCTCTGTCTAGGTTCTCACCATGTGTCACTTTCGGTGTTTTTTACAGATGAAGAAAAACTATCTCTCGCGACTTCCAGAAGATAATAGCTAGTTAGTGAGGAATGAATGTGCCCTCACAAGAAGAATGAGTGAAATTAAGAGCCTTTAACTTCCTACAGGCCTAGCTAGATCAAAATAACAAGCCAATAATAAATAACAGAGGAAGAGATTAAAAGAGAGTAGAAGAGTTAGTTAGCATGAGTTAGGAGACAATAAAGTGGAGAGGGTGGTGGGAAGTTGTGCATAACAATTCTACAAATGTCAAAAGATTCTGAAGAGATAAAAACCATTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTAGTTTCTGATGCTGCAACTTCACAAGAACAAGCTCCAAGGGAAATGGACTCTTCAGAACCCAACAAGGATGGTGCTTGTGCTGCAGCAGCAGTTACTAATAACGCTGGTTCCATTAGTGGGGAGAAGGCAGAGAGTGTTCCTTCAGTTGGGTTTGGAGAGCTTTTCAGATTCGCTGATGGGTTGGATTACGTTCTCATGGGAATTGGAACTGTTGGAGCAGTTGTGCACGGTTGTTCTCTGCCTCTCTTTCTTCGTTTCTTCGCGGATCTTGTCAATTCTTTTGGCTCCAATGCTAATGATGTTGACAAGATGACTCAGGAAGTGGTCAAGTATGCATTTTACTTCCTGGTGGTGGGGGCTGCTATATGGGCGTCTTCATGGGCAGAGATTTCGTGTTGGATGTGGAGCGGGGAGCGTCAATCGACTAAGATGAGAATCAAGTATCTGGAGGCTGCGTTGAACCAGGACATTCAGTTCTTTGACACTGATGTTCGGACATCCGATGTTGTTTTTGCCATCAACACTGATGCTGTCATGGTCCAGGATGCCATTAGTGAGAAGGTACAGTGCCAAATTCTACAGTTGGGGAATTTCATTCACTACATGGCCACGTTTGTTTCTGGCTTTGTTGTGGGTTTCACTGCTGTGTGGCAACTGGCTCTGGTCACTCTTGCTGTTGTCCCTATGATAGCTGTGATTGGAGGCATTCACACTGCCACCTTGGCCAAGCTCTCTGGCAAGAGCCAGGAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGACAGTGGCGCAAATCCGGGTAGTGCTTGCCTTTGTTGGGGAGTCCAGGGCATTGCAGGCCTATTCGTCAGCCTTGAGGGTTGCGCAGAAGATTGGCTACAAAACTGGGTTTGCTAAGGGAATGGGATTGGGTGCCACCTACTTTGTTGTTTTCTGCTGTTATGCGCTTCTGCTGTGGTATGGAGGCTATCTTGTTAGGCACCATGCCACCAATGGAGGACTTGCCATTGCAACCATGTTTGCTGTTATGATTGGTGGATTGGGTTTAGGGCAATCTGCACCTAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAAATTTTCCGCATAATTGATCACAAGCCGAGTATAGATCGAAACAGTGAATCTGGCATTGAACTAGAGACAGTTACTGGGCTCGTGGAGCTGAAAAATGTGGACTTTTCTTACCCATCCAGACCAGAGGTTAGAATCCTCAATGATTTCTCCCTGAATGTGCCTGCTGGCAAGACCATAGCTTTGGTGGGTAGCAGTGGCTCTGGCAAGAGCACTGTTGTCTCCCTCATTGAGAGATTCTACGACCCAACTTCAGGCCAAGTTTTGCTAGATGGGCATGACATTAAAACTTTGAAGCTTAGATGGTTGAGGCAGCAGATAGGACTGGTGAGCCAAGAGCCTGCTTTGTTTGCTACCACAATACGAGAAAATATACTGTTGGGAAGGCCTGATGCGGACCAGGTTGAGATTGAAGAAGCTGCCAGGGTTGCTAATGCCCATTCCTTCATCATTAAGCTTCCCGATGGCTATGAAACCCAGGTTGGAGAAAGAGGGCTGCAACTTTCTGGAGGGCAAAAACAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGACGAGGCAACAAGTGCATTGGACTCAGAGTCAGAAAAGCTGGTGCAAGAAGCCCTTGATAGGTTCATGATTGGCAGAACGACTCTTGTAATTGCCCATCGCCTCTCCACAATTCGCAAAGCTGACCTTGTAGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTCTCAAAAGGTGAAAGTGGAGTCTATGCCAAGCTTATAAAGATGCAGGAGATGGCTCATGAAACTGCCATGAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTATAAGCTCTCCAATAATAGCTAGGAATTCTTCTTATGGACGGTCACCATACTCGCGTAGGCTATCTGATTTCTCTACATCTGATTTTAGTCTGTCCCTCGATGCATCACTTCCAAGTTACAGGCTCGAAAAGCTTGCTTTCAAAGAGCAAGCTAGTTCCTTCTGGAGACTCGCAAAAATGAACTCTCCCGAATGGCTTTATGCTTTAATTGGCTCTATAGGGTCTGTTGTTTGTGGATCCCTTAGTGCCTTCTTTGCTTATGTTCTTAGTGCGGTACTCAGTGTGTATTACAATCCAGACCACAGATACATGATCCGCGAAATAGAAAAGTACTGCTACTTGTTGATTGGACTTTCGTCAACTGCACTGCTCTTCAACACATTGCAACACTTCTTCTGGGACATTGTTGGGGAAAATCTTACAAAACGTGTGAGGGAGAAAATGCTGACAGCAGTGCTCAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCCAGGATTGCTGCAAGGCTGGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGAATTTCAGTGATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGTTTTGTGTTGCAGTGGCGCCTTGCCCTTGTCCTCATAGCTGTCTTTCCTGTTGTTGTTGCAGCCACAGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTGGAAGCTGCTCATGCAAAGGCTACACAACTTGCAGGAGAAGCTATAGCCAATGTAAGAACTGTTGCAGCCTTCAATTCAGAGACAAAAATTGTTGGCCTTTTCACCACCAATCTCCAAGCTCCACTGCAGCGTTGTTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGTGTAGCTCAGTTTGCACTTTATGCTTCATATGCACTTGGTCTTTGGTATGCTTCTTGGCTAGTAAAGCATGGCATCTCTGACTTCTCTAAAACAATCCGAGTTTTTATGGTCCTAATGGTTTCTGCAAATGGTGCTGCTGAAACTTTAACACTAGCTCCTGATTTTATCAAAGGAGGCAGAGCAATGAGGTCAGTCTTTGAACTCCTCGACCGTAGAACTGAAATAGAGCCTGATGATCAAGATGCCACTCCTGTTCCTGATCGTCTTCGTGGTGAAGTTGAACTTAAGCATGTAGACTTCTCTTATCCAACACGCCAGGATATGCCAGTTTTTCGTGATCTCAGTCTTCGTGCAAGGGCTGGTAAAACTCTTGCCCTTGTAGGACCGAGTGGCTGTGGTAAGAGCTCAGTAATTGCACTTATACAGAGATTCTATGATCCAACATCTGGTCGGGTCATGATTGATGGCAAGGACATCAGGAAATACAACCTCAAGGCCTTAAGAAGGCACATTTCTGTGGTACCTCAGGAGCCATGTTTGTTTGCAACTACTATTTACGAAAATATTGCTTATGGGCATGAGTCAGCCACTGAAGCTGAGATAATTGAAGCTGCAACTCTTGCCAATGCACACAAGTTCATATCTGCTTTGCCAGATGGATACAAAACATTTGTTGGAGAGAGGGGTGTTCAACTGTCTGGGGGACAAAAGCAAAGAATAGCCATTGCTCGGGCTTTTTTGAGGAAGGCTGAGCTTATGCTTCTTGATGAGGCCACGAGTGCACTTGATGCTGAATCTGAAAGATCTGTTCAGGAGGCTCTAGATCGTGCCTCCTCAGGAAAAACAACTATCATTGTTGCACACAGGCTATCAACTATCAGGAATGCCAATCTCATTGCTGTGATTGATGATGGAAAAGTAGCTGAACAAGGTTCTCATTCACAGTTATTGAAAAATCACCCTGATGGAATTTATGCACGCATGATTCAGTTACAAAGGTTCACACACAGCCAAGTCATTGGAATGGCCACAGGTTCAAGTTCTTCAACGAGACCAAAAGATGATGAAAGAGAAGGCTAGCCATTCAAATGAAATTTACCAGCTACAGGATTATAAGCCATATACCCATTATAATTATTGGCATTTTTGTTTGACCATAGTATAGTTTGTGTATCATCTCTACCCCCTCTTACCCCTCCTATTCAAGAATGTATCTTGTCTTTATGAATGTTACTAAGGAAATGACAAAGACAAATGAATACAGGAACGAGATTGAAATGGATGAATAGATGCTCATCCTTATTAATTTATTGAAGGCCACTTTTGCTTCAAACAATAAACAACGCCAATGGTTCAACACCTCTCATTCTCTATCTTGACGTGCAACAACACATTGTTTAGTTAGTACTTAGTAGCATATCAAAGTGCTTAATGATTGAAGAACCTATTAAACTGTCAATCAACAAAGCGTTATCATCAGGATGAATTTCTTTGGAAGCAAGATGTATTTGTTTTACGGTTATGCAAAATACGTTAGTTTTATATGCATATACCAAATAGATG 4868 0.4388 MSKDSEEIKTIEQWKWSEMQGLELVSDAATSQEQAPREMDSSEPNKDGACAAAAVTNNAGSISGEKAESVPSVGFGELFRFADGLDYVLMGIGTVGAVVHGCSLPLFLRFFADLVNSFGSNANDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTKMRIKYLEAALNQDIQFFDTDVRTSDVVFAINTDAVMVQDAISEKVQCQILQLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTATLAKLSGKSQEALSQAGNIVEQTVAQIRVVLAFVGESRALQAYSSALRVAQKIGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPSIDRNSESGIELETVTGLVELKNVDFSYPSRPEVRILNDFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPDGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGESGVYAKLIKMQEMAHETAMNNARKSSARPSSARNSISSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASLPSYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHRYMIREIEKYCYLLIGLSSTALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTTNLQAPLQRCFWKGQISGSGYGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRQDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKALRRHISVVPQEPCLFATTIYENIAYGHESATEAEIIEAATLANAHKFISALPDGYKTFVGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTHSQVIGMATGSSSSTRPKDDEREG 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01989 1342 Gene3D ABC transporter type 1, transmembrane domain 732 1041 IPR036640 GO:0005524|GO:0016020
Pste5g01989 1342 Gene3D - 411 661 IPR027417 -
Pste5g01989 1342 Gene3D - 1065 1316 IPR027417 -
Pste5g01989 1342 FunFam ABC transporter B family member 1 732 1041 - -
Pste5g01989 1342 FunFam ABC transporter B family member 19 1042 1064 - -
Pste5g01989 1342 CDD ABC_6TM_Pgp_ABCB1_D1_like 90 394 - -
Pste5g01989 1342 PANTHER ABC TRANSPORTER B FAMILY 59 805 IPR039421 -
Pste5g01989 1342 Pfam ABC transporter transmembrane region 754 1023 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01989 1342 Pfam ABC transporter transmembrane region 91 371 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01989 1342 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1076 1312 IPR003439 GO:0005524
Pste5g01989 1342 MobiDBLite consensus disorder prediction 25 48 - -
Pste5g01989 1342 FunFam ABC transporter B family member 1 77 419 - -
Pste5g01989 1342 Pfam ABC transporter 439 588 IPR003439 GO:0005524
Pste5g01989 1342 CDD ABC_MTABC3_MDL1_MDL2 1076 1315 - -
Pste5g01989 1342 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 421 657 IPR003439 GO:0005524
Pste5g01989 1342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1067 1315 IPR027417 -
Pste5g01989 1342 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 753 1040 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01989 1342 SUPERFAMILY ABC transporter transmembrane region 740 1060 IPR036640 GO:0005524|GO:0016020
Pste5g01989 1342 ProSitePatterns ABC transporters family signature. 1215 1229 IPR017871 GO:0005524|GO:0016887
Pste5g01989 1342 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 92 386 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g01989 1342 SUPERFAMILY ABC transporter transmembrane region 78 405 IPR036640 GO:0005524|GO:0016020
Pste5g01989 1342 Gene3D ABC transporter type 1, transmembrane domain 77 673 IPR036640 GO:0005524|GO:0016020
Pste5g01989 1342 Gene3D ABC transporter type 1, transmembrane domain 1042 1319 IPR036640 GO:0005524|GO:0016020
Pste5g01989 1342 ProSitePatterns ABC transporters family signature. 560 574 IPR017871 GO:0005524|GO:0016887
Pste5g01989 1342 MobiDBLite consensus disorder prediction 1323 1342 - -
Pste5g01989 1342 CDD ABC_6TM_Pgp_ABCB1_D2_like 742 1058 - -
Pste5g01989 1342 SMART AAA_5 448 634 IPR003593 GO:0016887
Pste5g01989 1342 SMART AAA_5 1103 1295 IPR003593 GO:0016887
Pste5g01989 1342 FunFam ABC transporter B family member 1 1066 1316 - -
Pste5g01989 1342 Pfam ABC transporter 1095 1243 IPR003439 GO:0005524
Pste5g01989 1342 CDD ABC_MTABC3_MDL1_MDL2 421 660 - -
Pste5g01989 1342 FunFam ABC transporter B family member 1 411 661 - -
Pste5g01989 1342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 660 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01989 Pste-Chr5 12602180 12608905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01989 65 1337 Calmodulin-binding Proteins AT2G36910 89.168 0.0 2317