Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01971 CGTTTGTTTGAAACTGTAAAGCTTCTACCTGAGTTTGGTGGTGCTTGGCAAAGTAAGCCTAAGAGGGAATGTAGCAAAAAGACAGTTGCATTCAAGAGTGGTAAGGATTCAAAAGACAAGTCTCCTATACAGGATGAAAATACATTTCAAAGAGCAAAACTCACTCTTGTTCATCAAGGAGAAATAAAAGAGTGTGGAAGCTCCTCAAAGCCCTTGAGTGGTAAAAAGTTTTTGGTTGTTGATGACTCTGAATTGTTGCGGAAGCTAGCTTCGGCTACTTTGATTTCACTTGGTGCAACTATGGAGCAATGTGAGAATGGTGAAGAAGCAGTCCACCTAGTTGATGAGGGTCTGTCTCGAGATTTTCCTAATCCTCCTTACCATTACATCTTAATGGATTGCCAGATGCCGGTAATGGATGGGGTTGAGGCAACAAAGTGGATACGAAAGATAGAGAAACCTTATGGTGTTCGTATTCCTATAATTGCATTGACAGCTTGCACTGAGAATATGAAGATAGAGAATGGAATAGACTTTCGTATAATGAAGCCCATTAAGAAAGAACATATACTTGAAGCCATCGCATATATACATGCGACCCAACTAGCAAATGGTTCGTACACGGGGAAG 630 0.4079 RLFETVKLLPEFGGAWQSKPKRECSKKTVAFKSGKDSKDKSPIQDENTFQRAKLTLVHQGEIKECGSSSKPLSGKKFLVVDDSELLRKLASATLISLGATMEQCENGEEAVHLVDEGLSRDFPNPPYHYILMDCQMPVMDGVEATKWIRKIEKPYGVRIPIIALTACTENMKIENGIDFRIMKPIKKEHILEAIAYIHATQLANGSYTGK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01971 210 Pfam Response regulator receiver domain 78 194 IPR001789 GO:0000160
Pste5g01971 210 ProSiteProfiles Response regulatory domain profile. 76 198 IPR001789 GO:0000160
Pste5g01971 210 SMART REC_2 75 194 IPR001789 GO:0000160
Pste5g01971 210 PANTHER TWO-COMPONENT HISTIDINE KINASE 40 195 - -
Pste5g01971 210 CDD REC_hyHK_CKI1_RcsC-like 77 194 - -
Pste5g01971 210 Gene3D - 57 201 - -
Pste5g01971 210 SUPERFAMILY CheY-like 72 196 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01971 Pste-Chr5 12514272 12515332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01971 1 166 Histidine Kinase Gene Family AT2G47430 36.453 1.67e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste5g01971 Response_reg 1.8e-16 CL0304