Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01961 GAAAATATCTATGAAAATAAACACAAACACAAAATTTCCCATCCCAAACCATGCCCCTCCATTCACCATTCACCCAGCGAATCCCATAAAACAACAACCACAGTAGCATCATCATCATCATCAACAATCAACAAACAACAAACGGATGAACCCAAATCCTTCCCTTCCCTTCCCTCACTATTCCATCTCTCTCACTACTTTTTTTTCCCTTTAACTCTCTCTCTTTCTCTTTCTCTTTCTCTATCTCTCTTTTGGTTCCATTAAGTTTTACAACCACCAACCCTAGAGCGTTGAGGCGACAGCACAGTACATCAAGAACAGCAAAGTCTACATAGGAGGGAAACAGCAACAGCAACAGCAACAGCAACAGCAACAGTAACAGTAGCTAGCACCACCACCACCATGTCCCTTGAAGAGTCCCTAAGATCTCTCTCTCTGGATTACCTCAACCTCCTCATCAACGGCCAGGCCTTCAGCGACGTCACTTTCAGCGTCGAGGGTCGTCTCGTCCACGCCCACCGCTGCATACTCGCAGCCCGCAGCCTCTTCTTCAGGAAATTCTTCTGCGGGCCTGACCCACCTTCCGGGCTGGACCCCTCCGGCCCAAGACTCAACCCCCGCTCCGGGGTAATTCCCGTTAACTCCGTCGGCTATGAGGTCTTCCTTCTCATGCTGCAGTTCCTCTACAGTGGCCAAGTCTCTATTGTTCCCCAGAAACACGAGGCCAGGCCCAATTGCGGAGAGAGAGGCTGCTGGCACACGCATTGCACCTCTGCCGTTGATCTCGCCCTCGACACCCTCGCCGCCGCCAGATACTTCGGCGTTGAACAGCTCGCATTGCTCACTCAGTCGTGTGTTTCTTCATGGTTTGGGAATTCGGACAACTACTGCTCTCGTTTTGGGAACTGGGCTCGCCTTCTTGTCTTGCACACAAAACAACTTGCGAGCATGGTAGAGAAGGCTTCGATCGAGGATGTAATGAAGGTGCTGTTGGCGTCAAGAAAGCAAGACATGCAGCAACTATGGGCCACTTGTTCCCACTTGGTAGCAAAATCAGGTCTCCCACCCGAGGTTCTCGCAAAGCACCTACCTATAGACATTGTGGCCAAAATCGAAGAGCTTCGTCTGAAATCCTCACTGGCTCGAAGGTCTTTGGTTCCACACCACCACTCCCATCCCCACCACCGCCACCCGGCACTCGACCTAGAGGACCAGAAAATCAGGCGAATGAGAAGAGCCCTGGACTCCTCCGATGTGGAACTCGTGAAGCTGATGGTAATGGGGGAAGGCCTCAACCTCGATGAGGCACTTGCCTTACCCTACGCGGTTGAGAATTGCAGCAGGGAAGTGGTTAAGGCCTTGCTGGAGCTGGGTGCAGCCGATGTTAACTACCCTTCGGGCCCCGCCGGGAAGACGCCGCTTCACATTGCGGCGGAGATGGTGTCGCCCGACATGGTGGCGGTGCTGCTGGACCACCACGCCGACCCCAACGTAAGAACCGTTGATGGGGTCACGCCGCTAGACATTCTCAGAACCCTAACCTCGGACTTCCTCTTCAAGGGTGCTGTCCCGGGATTGACCCACATCGAGCCCAACAAACTGAGGCTGTGCTTGGAGCTTGTTCAATCCGCGGCTCTTGTCATGTCACGAGAAGAAGGCAACAACAACAACAACAACAACAATGCTCCTAATTCGGCAGCACCCATTTACCCTCCTCCCATGAACGAGGATCACAACAGCAGTAGCAGCAGCGGGAACAACAACACCAACACCAACACCAACAACAACATTGGTAACCTCAACTTGGATTCCAGGTTGGTGTATCTCAACCTGGGTGCCACCGCTTCGATGAGTTCGAGGCTGGACGGCGGTGAGGACGAGAGAGAAGCCATGAACACGAGCATGTATCACCACCACCACCACTCTCATGATTTCTAG 1938 0.5284 MSLEESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPSGPRLNPRSGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEARPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQSCVSSWFGNSDNYCSRFGNWARLLVLHTKQLASMVEKASIEDVMKVLLASRKQDMQQLWATCSHLVAKSGLPPEVLAKHLPIDIVAKIEELRLKSSLARRSLVPHHHSHPHHRHPALDLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALPYAVENCSREVVKALLELGAADVNYPSGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVMSREEGNNNNNNNNAPNSAAPIYPPPMNEDHNSSSSSGNNNTNTNTNNNIGNLNLDSRLVYLNLGATASMSSRLDGGEDEREAMNTSMYHHHHHSHDF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01961 511 MobiDBLite consensus disorder prediction 417 464 - -
Pste5g01961 511 ProSiteProfiles BTB domain profile. 25 103 IPR000210 GO:0005515
Pste5g01961 511 Gene3D Potassium Channel Kv1.1; Chain A 3 218 IPR011333 -
Pste5g01961 511 SMART BTB_4 25 156 IPR000210 GO:0005515
Pste5g01961 511 FunFam regulatory protein NPR5 isoform X2 266 383 - -
Pste5g01961 511 Gene3D - 268 383 IPR036770 -
Pste5g01961 511 ProSiteProfiles Ankyrin repeat profile. 335 367 IPR002110 GO:0005515
Pste5g01961 511 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 170 502 IPR044284 GO:0099402
Pste5g01961 511 Pfam Ankyrin repeats (3 copies) 283 365 IPR002110 GO:0005515
Pste5g01961 511 CDD BTB_POZ_NPR_plant 8 149 - -
Pste5g01961 511 Pfam BTB/POZ domain 16 105 IPR000210 GO:0005515
Pste5g01961 511 MobiDBLite consensus disorder prediction 417 431 - -
Pste5g01961 511 FunFam regulatory protein NPR5 isoform X1 4 162 - -
Pste5g01961 511 SMART ANK_2a 335 364 IPR002110 GO:0005515
Pste5g01961 511 SMART ANK_2a 300 330 IPR002110 GO:0005515
Pste5g01961 511 SUPERFAMILY Ankyrin repeat 294 378 IPR036770 -
Pste5g01961 511 SUPERFAMILY POZ domain 9 149 IPR011333 -
Pste5g01961 511 ProSiteProfiles Ankyrin repeat region circular profile. 335 365 - -
Pste5g01961 511 MobiDBLite consensus disorder prediction 441 464 - -
Pste5g01961 511 Pfam Domain of unknown function (DUF3420) 219 277 IPR024228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01961 Pste-Chr5 12447707 12450599 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste5g01961 Ank_2 6.3e-10 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01961 5 12447707 12450599 Pste5g01961 5 12447707 12450599 ECH