Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01952 ATGTCTGAGATGATAAAGCATCCAAGAGTGATGAAGAAAGCACAAGCTGAAGTGAGAATGATATTCAATATGAAAGGAAAGGTTGATGACACATGCATCAATGAACTCAAATATTTAAAATCAGTTGTGAAAGAAACCCTAAGATTACACCCTCCAGGTCCTCTTTTGCTTCCAAGAGAGTGTACACAGGATTGCAAGATTAATGGTTATGACATACCCATCAAAAGCCTTGTCATAGTCAATGCCTGGGCAATTGGAAGAGATCCAAACTACTGGACTGATCCAGAGAGATTTTATCCAGAGAGATTCATGGATAGCTCTGTTGACTACAAAGGGAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATTTGCCCAGGCAGCACGTTTGGTTTGATAAATGTTGAGCTAACTCTTGCATTATTCTTGTTTCACTTTGATTGGAAGCTTCCCAATGGAATAAAAATGAAGACTTAG 483 0.3851 MSEMIKHPRVMKKAQAEVRMIFNMKGKVDDTCINELKYLKSVVKETLRLHPPGPLLLPRECTQDCKINGYDIPIKSLVIVNAWAIGRDPNYWTDPERFYPERFMDSSVDYKGSNFEYIPFGAGRRICPGSTFGLINVELTLALFLFHFDWKLPNGIKMKT 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01952 160 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Pste5g01952 160 SUPERFAMILY Cytochrome P450 1 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 Pfam Cytochrome P450 3 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 Gene3D Cytochrome P450 1 160 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g01952 160 PANTHER OS08G0105600 PROTEIN 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01952 Pste-Chr5 12380106 12380588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01952 1 159 Cytochrome P450 AT3G26210 56.875 4.58e-62 197