Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01931 ATGGAAGCAACAAGAACAAGTAGCGTTAGCAATGGGCACGAAAGCGGTGGTACCTTGTGCATGTCCACTAAGACTAGGAGCAGCGACCCGCTGAATTGGGGAGTGGCAGCGGAGGCACTCAAAGGAAGCCACCTGGACGAGGTGAAGAGAATGGTGGCAGAGTACCGGAAGCCGGTGGTCCGACTGGGTGGAGAGACGCTGACCATTGCTCAGGTGGCGGCGGTGGCCGGACACGACCAAGGCGTGAGGGTGGACCTGTCGGAGTCCGCCAGGGAAGGAGTTAAGGCCAGCAGTGAGTGGGTGATGAACAGCATGACCAACGGCACTGACAGTTACGGTGTCACCACCGGCTTCAGTGCCACCTCACACCGCCGAACCAAACAGGGTGGTGCTTTGCAGAAGGAACTCATCAGATTTTTGAACGCTGGAATATTTGGAAATGGAACTGAATCATGCCACACGCTGCCACACACTGCAACCAGAGCAGCCATGTTAGTGAGGATCAACACTCTTCTTCAGGGGTACTCAGGAATCAGATTTGAAATCTTGGAAGCCATTACCAGCTTGCTTAACAAGAATGTTACCCCATGTTTGCCACTTCGTGGAACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCTTACATTGCTGGTTTGCTAACTGGCAGACCCAATTCCAAAGCTGTTGGACCTTCTGGGGAGGTACTGAATGCTAAGGAAGCCTTTAAATTGGCTAACATCAATTCTGACTTCTTTGAATTGCAACCCAAGGAAGGTCTTGCCCTTGTTAATGGCACTGCTGTTGGTTCTGGCTTAGCCTCCGTGGTCCTCTTTGAGGCAAATATACTAGCTGTGTTGGCTGAAGTTCTATCTGCTATTTTTGCTGAAGTGATGCAAGGGAAACCTGAATTCACTGACCATTTGACACACAAATTAAAGCACCACCCTGGTCAAATTGAGGCTGCTGCTATTATGGAGCACATCTTGATGGAATGGCTTGGTCCTCTCATTGAAGTGATTCGTTTCTCAACCAAGTCAATCGAGAGAGAGATTAACTCTGTCAATGACAACCCTCTCATTGATGTTTCAAGGAACAAGGCACTGCATGGTGGTAATTTCCAAGGAACCCCTATTGGAGTATCAATGGACAATACACGTTTGGCTCTAGCATCTATTGCAGAAATCCTAGCTTGGACTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCTTATTGCTCGAACTCCAATATCTTGCAAATCCGTAACAAGCCATGTCCAAAGCGCCGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCAGCTAGGAAGACAAATGAAGCTATTGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAAAGCTCGGTCAAAAACACTGTGAGCCAAGTTGTCAAGATGACCCTCACCACAGGTGTCAATGGAGAGCTCCATCCTTCAAGATTCTGTGAAAAGGATCTCTTAAAAGTGGTCGATAGGGAGTATGTGTTTTCCTATATTGATGATCCATGCAGTGCAACATATCCATTGATGCAAAAACTAAGGCAAGTTCTTGTAGATCATGCATTGGTAAATGCAGAGAATGAGAAGGATGTGAACACATCAATCTTTCAAAAGATTGCAACCTTTGAGGAGGAGCTCAAGACTCTCTTACCAAAAGAGGTTGAAAGGGCAAGAGCTACTTACGAGTGTGGGAAAGCTGCAATTCCAAACAAGATCAAAGAATGCAGATCTTACCCATTGTACAAGTTTGTGAGAGAGGAATTAGGGACTGGGTTGCTAACGGGAGAAAAGGTTAAGTCACCCGGTGAAGAGTGTGACAAATTATTCACAGCAATGTGCCAGGGTAAAATTATTGATCCTCTTCTTGAATGCATTGGAGAGTGGAATGGAGCTCCTCTTCCAATTTGTTAA 1989 0.4625 MEATRTSSVSNGHESGGTLCMSTKTRSSDPLNWGVAAEALKGSHLDEVKRMVAEYRKPVVRLGGETLTIAQVAAVAGHDQGVRVDLSESAREGVKASSEWVMNSMTNGTDSYGVTTGFSATSHRRTKQGGALQKELIRFLNAGIFGNGTESCHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITSLLNKNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKEAFKLANINSDFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILMEWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIAEILAWTMVSRELKLPWLLIARTPISCKSVTSHVQSAEQHNQDVNSLGLISARKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKSSVKNTVSQVVKMTLTTGVNGELHPSRFCEKDLLKVVDREYVFSYIDDPCSATYPLMQKLRQVLVDHALVNAENEKDVNTSIFQKIATFEEELKTLLPKEVERARATYECGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVKSPGEECDKLFTAMCQGKIIDPLLECIGEWNGAPLPIC 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01931 662 FunFam Phenylalanine ammonia-lyase 475 596 - -
Pste5g01931 662 Gene3D Fumarase/aspartase (Central domain) 331 396 - -
Pste5g01931 662 Gene3D Fumarase/aspartase (Central domain) 267 330 - -
Pste5g01931 662 Gene3D - 475 596 IPR023144 -
Pste5g01931 662 SUPERFAMILY L-aspartase-like 29 662 IPR008948 GO:0003824
Pste5g01931 662 CDD PAL-HAL 65 472 IPR001106 -
Pste5g01931 662 Gene3D - 20 266 IPR024083 -
Pste5g01931 662 FunFam Phenylalanine ammonia-lyase 20 266 - -
Pste5g01931 662 PANTHER HISTIDINE AMMONIA-LYASE 25 330 IPR001106 -
Pste5g01931 662 Gene3D Fumarase/aspartase (Central domain) 420 657 - -
Pste5g01931 662 Pfam Aromatic amino acid lyase 67 398 IPR001106 -
Pste5g01931 662 Pfam Aromatic amino acid lyase 417 482 IPR001106 -
Pste5g01931 662 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 202 218 IPR022313 GO:0016841
Pste5g01931 662 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01931 Pste-Chr5 12246834 12250422 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01931 10 662 Monolignol Biosynthesis Gene Families AT2G37040 70.891 0.0 1019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01931 5 12246834 12250422 Pste5g01931 5 12246834 12250422 ECH
Pste4g02120 4 15499649 15504452 Pste5g01931 5 12246834 12250422 ECH