Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01929 ATGGAAGCAACAAGAACAAGTAGCGTTAGCAATGGGCACGAAAGCGGTGGTACCTTGTGCATGTCCACTAAGACTAGGAGCAGCGACCCGCTGAATTGGGGAGTGGCAGCGGAGGCACTCAAAGGAAGCCACCTGGACGAGGTGAAGAGAATGGTGGCAGAGTACCGGAAGCCGGTGGTCCGACTGGGTGGAGAGACGCTGACCATTGCTCAGGTGGCGGCGGTGGCCGGACACGACCAAGGCGTGAGGGTGGACCTGTCGGAGTCCGCCAGGGAAGGAGTTAAGGCCAGCAGTGAGTGGGTGATGAACAGCATGACCAACGGCACTGACAGTTACGGTGTCACCACCGGCTTCGGTGCCACCTCACACCGCCGAACCAAACAGGGTGGTGCTTTGCAGAAGGAACTCATCAGATTTTTGAACGCTGGAATATTTGGAAATGGAACTGAATCATGCCACACGCTGCCACACACTGCAACCAGAGCAGCCATGTTAGTGAGGATCAACACTCTTCTTCAGGGGTACTCAGGAATCAGATTTGAAATCTTGGAAGCCATTACCAGCTTGCTTAACAAGAATGTTACCCCATGTTTGCCACTTCGTGGAACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCTTACATTGCTGGTTTGCTAACTGGCAGACCCAATTCCAAAGCTGTTGGACCTTCTGGGGAGGTACTGAATGCTAAGGAAGCCTTTAAATTGGCTAACATCAATTCTGACTTCTTTGAATTGCAACCCAAGGAAGGTCTTGCCCTTGTTAATGGCACTGCTGTTGGTTCTGGCTTAGCCTCCGTGGTCCTCTTTGAGGCAAATATACTAGCTGTGTTGGCTGAAGTTCTATCTGCTATTTTTGCTGAAGTGATGCAAGGGAAACCTGAATTCACTGACCATTTGACACACAAATTAAAGCACCACCCTGGTCAAATTGAGGCTGCTGCTATTATGGAGCACATCTTGGATGGAAGTTCCTACATGAAAGCTGCTAAGAAGTTGCATGAGATAGATCCTTTACAAAAGCCAAAGCAAGACAGATATGCCCTGAGAACTTCACCACAGTGGCTTGGTCCTCTCATTGAAGTGATTCGTTTCTCAACCAAGTCAATCGAGAGAGAGATTAACTCTGTCAATGACAACCCTCTCATTGATGTTTCAAGGAACAAGGCACTGCATGGTGGTAATTTCCAAGGAACCCCTATTGGAGTATCAATGGACAATACACGTTTGGCTCTAGCATCTATTGGTAAACTTATGTTTGCTCAATTCTCTGAGCTTGTCAACGATTTTTACAACAATGGATTGCCCTCAAATCTCACTGCCAGCAGAAATCCTAGCTTGGACTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCTTATTGCTCTGAACTCCAATATCTTGCAAATCCGGTAACAAGCCATGTCCAAAGCGCCGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCAGCTAGGAAGACAAATGAAGCTATTGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAAAGCTCGGTCAAAAACACTGTGAGCCAAGTTGTCAAGATGACCCTCACCACAGGTGTCAATGGAGAACTCCATCCTTCAAGATTCTGTGAAAAGGATCTCTTAAAAGTGGTTGATAGGGAGTATGTGTTTTCCTATATTGATGATCCATGCAGTGCAACATATCCATTGATGCAAAAACTAAGGCAAGTTCTTGTAGATCATGCATTGGTAAATGCAGAGAATGAGAAGGATGTGAACACATCAATCTTTCAAAAGATTGCAACCTTTGAGGAGGAGCTCAAGACTCTCTTACCAAAAGAGGTTGAAAGGGCAAGAGCTACTTACGAGTGTGGGAAAGCTGCAATTCCAAACAAGATCAAAGAATGCAGATCTTACCCATTGTACAAGTTTGTGAGAGAGGAATTAGGGACTGGGTTGCTAACGGGAGAAAAGGTTAGGTCACCCGGTGAAGAGTGTGACAAATTATTCACAGCAATGTGCCAGGGTAAAATTATTGATCCTCTTCTTGAATGCATTGGAGAGTGGAATGGAGCTCCTCTTCCAATTTGTTAA 2163 0.4586 MEATRTSSVSNGHESGGTLCMSTKTRSSDPLNWGVAAEALKGSHLDEVKRMVAEYRKPVVRLGGETLTIAQVAAVAGHDQGVRVDLSESAREGVKASSEWVMNSMTNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESCHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITSLLNKNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKEAFKLANINSDFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKSSVKNTVSQVVKMTLTTGVNGELHPSRFCEKDLLKVVDREYVFSYIDDPCSATYPLMQKLRQVLVDHALVNAENEKDVNTSIFQKIATFEEELKTLLPKEVERARATYECGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVRSPGEECDKLFTAMCQGKIIDPLLECIGEWNGAPLPIC 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01929 720 Gene3D Fumarase/aspartase (Central domain) 267 715 - -
Pste5g01929 720 Pfam Aromatic amino acid lyase 67 540 IPR001106 -
Pste5g01929 720 NCBIfam phenylalanine ammonia-lyase 29 709 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pste5g01929 720 FunFam Phenylalanine ammonia-lyase 267 582 - -
Pste5g01929 720 PANTHER HISTIDINE AMMONIA-LYASE 25 720 IPR001106 -
Pste5g01929 720 SUPERFAMILY L-aspartase-like 29 720 IPR008948 GO:0003824
Pste5g01929 720 Gene3D - 533 654 IPR023144 -
Pste5g01929 720 FunFam Phenylalanine ammonia-lyase 20 266 - -
Pste5g01929 720 Gene3D - 20 266 IPR024083 -
Pste5g01929 720 CDD PAL-HAL 65 530 IPR001106 -
Pste5g01929 720 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 202 218 IPR022313 GO:0016841
Pste5g01929 720 FunFam Phenylalanine ammonia-lyase 533 654 - -
Pste5g01929 720 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01929 Pste-Chr5 12233795 12237387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01929 10 720 Monolignol Biosynthesis Gene Families AT2G37040 81.869 0.0 1240