Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01924 TATTTATCGTCAACTTGCCCACTGCTTAGGGTTTGCAGGGCTATTATTCCATTCCATTCCATCCGTTTCTTCTTCTGGGTGTTGCTTAAAATCTGTGGAAAGTTCATTTATTTTCGATTTTCATGCGACCAGGGTCTTTTGGGGTTAAGGTTTGTGGAGGATAAGATGGTCGTTGCGCTGAACATGGTTCTTGATGGGTAGCAGAAGTAGAACGTTAAACGTTAACACTACTAAGGACACTAACAAGGTTGTGAACGGGATGCCAAGCTACGCTCCTCCATTGCCTTCTTCTTCTAGTTCCATATTGGAGACAGTTCCTCCTGTTCCTTCCATTATACTGATTCGTTCATCTTCATTGAAACGGGATGTCAAAGTTTCATCTAATTCTTGGGCAATAGTAGACGCAACTAATGTGCATCCTTCCCGAATGTCTGAATTTGGAACTTTGGAGCAATCTCTTGGATTTCGTGTTGAGGATACCATCAACCTTAGTAGAAGATTTTATAAATCTTGTCGCAACATACTCCAGTTCCTTGTATTGTTGTGCTTGCCAAGGCCCTTCCATATTGTTCCCGCCTCTTGGGATATTCTCTTCATTTCTCTCAAAGATGCTGCTCGCTATCCAGTGTTTAATCAAATGAAATCAAATAGCCAAGTTCTAGGGGCTGATATTCAATTTGGTGCTTTAAATAAGTCGATTGCAACATCGGATATAAACCTCTCTGCTGCTATCACTGGGTCTCAGATATTGCCATTACAACAAAAGGATTCACAACCAACTCTAGCATCAACATCTGCTGGTCATCGTGAGAACTGGGGTGAGACCAACATGGCTGATGCTAGCCCCAGGACTGATACTTCCACAGATGATACAGAGGACAAAAATCAAAGGCCTGAAAGGGGTGAATCCAGTGATAGATCAAAAGATAAATCAGATCAAAAGACATTAAGACGGCTTGCTCAAAATCGTGAGGCTGCCAGGAAAAGTCGATTGAGGAAAAAGGCATATGTGCAACAATTGGAGAGCAGTAGGCTGAAACTGACCCAACTTGAACAGGAACTTCAGCGAGCTCGCCAGCAGGGAATATTTATATCAAGCACTGGAGATCAGACCCAATCAATGAGTGGAAATGGTATTTAA 1141 0.4233 MGSRSRTLNVNTTKDTNKVVNGMPSYAPPLPSSSSSILETVPPVPSIILIRSSSLKRDVKVSSNSWAIVDATNVHPSRMSEFGTLEQSLGFRVEDTINLSRRFYKSCRNILQFLVLLCLPRPFHIVPASWDILFISLKDAARYPVFNQMKSNSQVLGADIQFGALNKSIATSDINLSAAITGSQILPLQQKDSQPTLASTSAGHRENWGETNMADASPRTDTSTDDTEDKNQRPERGESSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGDQTQSMSGNGI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01924 315 MobiDBLite consensus disorder prediction 1 20 - -
Pste5g01924 315 Coils Coil 269 296 - -
Pste5g01924 315 MobiDBLite consensus disorder prediction 1 22 - -
Pste5g01924 315 MobiDBLite consensus disorder prediction 191 252 - -
Pste5g01924 315 MobiDBLite consensus disorder prediction 191 220 - -
Pste5g01924 315 SUPERFAMILY Leucine zipper domain 250 293 IPR046347 GO:0003700|GO:0006355
Pste5g01924 315 MobiDBLite consensus disorder prediction 221 252 - -
Pste5g01924 315 FunFam BZIP family transcription factor 249 298 - -
Pste5g01924 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 253 268 IPR004827 GO:0003700|GO:0006355
Pste5g01924 315 CDD bZIP_HBP1b-like 250 302 - -
Pste5g01924 315 PANTHER TRANSCRIPTION FACTOR TGA9 204 307 - -
Pste5g01924 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 292 IPR004827 GO:0003700|GO:0006355
Pste5g01924 315 SMART brlzneu 246 309 IPR004827 GO:0003700|GO:0006355
Pste5g01924 315 Gene3D - 249 301 - -
Pste5g01924 315 Pfam Basic region leucine zipper 246 292 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01924 Pste-Chr5 12182447 12186053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01924 213 314 bZIP Transcription Factor Family AT3G12250 74.545 2.98e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g01924 bZIP_2 4.4e-07 CL0018