Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01923 ATGGTACTCAGTAGCATGGATGGTCTTGGGCAGGTTTTGCAAAAGTTTGTTCCTTTAAAATCCTCAATCAATTTAATCATCTATACAGGTGCTATGGCCTTTGATGTAGAGTACGCACGATGGTTAGAAGAGCATAATAGACAAACCAATGAACTAAGGGCTGCAATAAATTCTCATGCTGGAGATATTGAACTTCGAACCATAGTTGATAATTTCATGACGCAATTTGATGATATGTTTAGGCTGAAAGGAATTGCAGCAAAAGCTGATGTTTTCCACATTCTATCTGGAATGTGGAAAACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCATCTGAAATTCTCAAGCTTCTTGTAAGTCAGTTGGAGCCTTTAACTGAGCAACAATTGATGGGCATCTACAACTTGCAGCAGTCATCCCAGCAGGCTGAAGATGCTCTTTCGCAAGGAATGGATGCATTGCAGCAATCACTGTCTGAGACATTGGCAAATGGTTCCCCCAGCTCATCTGGCTCCTCAGGAAATGTGGCAAATTACATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGTACTCTTGAGGGTTTTCTTCGACAGGCTGACAACCTGCGGCAGCAAACATTACAGCAAATGCTTCGGATATTAACGACGAGGCAATCTGCTCGAGCTCTTCTGGCAATAAGTGATTATTTTTCGCGGCTGCGAGCGTTGAGTTCTCTGTGGCTTGCCAGGCCGAGGGAGTGAAGCATTTCACAGCTCCATGTCAGGACTTATTTCAGGCCTGACCCCCTTACTGATGAATGGAAGCTAGTGTCTTTTGACAATGAATTCCTATAGAAGCATAGTTGTGGTGCTTTAAACATTAGATGCTATGATTTTTCTACTCTGCCAACTGCTGCTGTGGTGCAACATTTTTCTTTAAGCTTTTCCTGTGCTTTTAAAATAGTCTCCAATAATTTGATTATATAGGTGTATCATGTATGATAGATAGAAGTTGTTGAAGGGGAAAATGTAGAAATAGTATCTGTATTTTAGGTTATAGCTGTTCATTGTATTTCAGAAATCAGCTTTTATTTAAGGGGGTTTTCCTCTTCTGCTTAATGGTTTGTGGTTGTTGGTTGCACATATGGCTCTGTATATATATATATATATATATACACGTTCTCTCTTGGTATATTAGAAAGAACATTATTACTATATAGTATCTGAATTGTGTAATGTATATGCGTTGATGATTATGAG 1254 0.4027 MVLSSMDGLGQVLQKFVPLKSSINLIIYTGAMAFDVEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFDDMFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSEILKLLVSQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPSSSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01923 251 Pfam Seed dormancy control 48 124 IPR025422 GO:0006351|GO:0043565
Pste5g01923 251 ProSiteProfiles DOG1 domain profile. 31 248 IPR025422 GO:0006351|GO:0043565
Pste5g01923 251 PANTHER TRANSCRIPTION FACTOR TGA9 24 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01923 Pste-Chr5 12180136 12181894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01923 29 251 bZIP Transcription Factor Family AT5G06950 76.233 1.37e-120 345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01923 5 12180136 12181894 Pste5g01923 5 12180136 12181894 ECH