Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01899 AAAAGAAGATAATGTGTCAAACAGAGAAGTTAAGATAGAGTTTTGGTCAATGTGTCAAAGACTTAGCTGAAATCAGAGCTTTGGTGTTCTTAACTCCCTTCCCTCCACATGCCCTCTTGCTTTCTTCACACGATTGCCATCTCCGAACCTTCACAAATAATCACACACGATCCTAGGAATTGCTACGCTTGTCTGGACCCATGAAGATTCCTTGTTCTTTTTTTACTTGTTTCTCTGCATCGGTCAAAGGACCAACCAAGCACGAAGAGCCAAAGGAACATAATGATGGAAACTTTCGCCTATTCACTTATAGAGAATTAAATTCTGCCACACGTGGTTTTCATCCCTCGGGAAAGATTGGAGAAGGAGGCTTTGGTGCTGTCTACAAGGGGCAGCTCCGGGATGGAACTTTTGTGGCTGTGAAAGTGCTTTCGATTGAGCTAGATTCCTTGAGAGGAGAAAGGGAATTTGTGGCAGAATTGACTACATTAGCAAATATCAAGCACCAAAATCTAGTCGTTCTCAGAGGGTGTTGTGTAGAAGGAGCCCACAGATACATTGTCTACGATTACATGGAAAACAATAGTCTTCATTATACTTTCTTAGGTTCTGAGCAAACAAGGATGAATTTCAGCTGGGAAGCTCGGAGGAATGTATCAATAGGCGTGGCCAGTGGGCTTGCCTTTCTCCACGAGGAACATCAGCCCCATATTGTGCATAGAGATATCAAGTCCAGCAATGTCCTTCTTGATCAAAACTTTACACCAAAAGTCTCAGATTTTGGTTTGGCCAAGCTGCTAAGAGATGAAAAGTCCTACATCACTACCCACGTCGCAGGGACATGGGGTTATCTTGCACCCGACTATGCTAGTTCTGGTCATTTGACACGAAAATCTGATGTTTATAGCTTTGGAGTATTACTTTTAGAAATTGTCAGTGGCCAACGAGTGGTAGATATTCATACAAACATGGACCGATTCATAGTCGAGAAGGCTTGGGCAGCGTACGAGGCTAATGATCTTTTGAGAATGGTGGATTCAATGCTGAATATGAACTATCCCGTGGAAGAAGCTAAACGGTTCCTAATGGTGGGGCTGCGTTGTGTGCAAGAAATGGCTAGACTTAGGCCACGAATGTCAGAGGTTGTAGACATGTTGATCAACGATATTGACATGGGAGAGCTTAGTATTTCACAACCAGGATTTGTCAATGATATGAGGAGCACCAGAATCAGGAGGCAAACCAATTCATCTGAAGAATCAAGTGCTACTGCAGCAACCTTTCCAGACTCTTCCGGATGGAGTAGAAGCAATCTTGCGCGTTAGATTTTCAAGGTTACTATGTAGGATCACATCATCAATGGGGATTCATCCAAGTTTTGCTCTAGCGTTTACAATCATAAATTGGAAAATGTTTCATAACATCAAAATGGGATGATGGGAAGATGTTACAAAAAACACACACAAGTGAGAGATAGAGATAACTATATACTTTGTGAAATGAGATTTGAATGTCAATTTTGTTGACGTTCAATAATTCAAATTATATTGCTTCCTCAGGGATTTTTCTTGATTGGATACAGTCATTTCAGCCGTGCCTCAACTGGGCTCCAATAGGCGGTGCAGAGTGCGCGTCATGTCGTCCAATGAATTGTTTCATGATTCTAAATTGATTGACGTCCTTTGTTGTTGAAAAAGAGGGTTTGATAGATATTACTGGC 1720 0.4186 MKIPCSFFTCFSASVKGPTKHEEPKEHNDGNFRLFTYRELNSATRGFHPSGKIGEGGFGAVYKGQLRDGTFVAVKVLSIELDSLRGEREFVAELTTLANIKHQNLVVLRGCCVEGAHRYIVYDYMENNSLHYTFLGSEQTRMNFSWEARRNVSIGVASGLAFLHEEHQPHIVHRDIKSSNVLLDQNFTPKVSDFGLAKLLRDEKSYITTHVAGTWGYLAPDYASSGHLTRKSDVYSFGVLLLEIVSGQRVVDIHTNMDRFIVEKAWAAYEANDLLRMVDSMLNMNYPVEEAKRFLMVGLRCVQEMARLRPRMSEVVDMLINDIDMGELSISQPGFVNDMRSTRIRRQTNSSEESSATAATFPDSSGWSRSNLAR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01899 374 ProSiteProfiles Protein kinase domain profile. 47 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01899 374 CDD STKc_IRAK 53 319 - -
Pste5g01899 374 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 125 330 - -
Pste5g01899 374 SUPERFAMILY Protein kinase-like (PK-like) 30 346 IPR011009 -
Pste5g01899 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pste5g01899 374 SMART serkin_6 47 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01899 374 Gene3D Phosphorylase Kinase; domain 1 11 124 - -
Pste5g01899 374 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 362 - -
Pste5g01899 374 Gene3D Transferase(Phosphotransferase) domain 1 125 328 - -
Pste5g01899 374 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Pste5g01899 374 FunFam Serine/threonine-protein kinase receptor 18 124 - -
Pste5g01899 374 MobiDBLite consensus disorder prediction 344 374 - -
Pste5g01899 374 Pfam Protein kinase domain 48 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01899 Pste-Chr5 11971141 11973409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01899 35 338 Receptor kinase-like Gene Family AT1G56120 48.860 6.32e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste5g01899 Pkinase 1.9e-47 CL0016