Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01889 ATGCCTCCTCCGCCTTTTCCTCTTCCACCATTACGCATTTTCCGCGTTTTCCTCGCTCCTTCTGCGACGATCTTCACTGCGATCGTTCTCGCTTTTCACCCTTCGCCAATCGCTCCCCGATCCTCCTCTTTGCGCTGCTTGCCGGATCGATCTTATAGTTTTAAGCTGTTGACCGACAATAATGATGATGGAAGAAGTTATGTTCTTGTTACTGACAAGGTTCTTGGTGAATGCTTAGAATTCATTTGTGTTTTCTCTGGTTTTGCCATTGCAGAGGACGTTTGCTATTCTTTGGGGGTGACTAAAGTGGGCTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGAGATCTTCAGCCTGGTCCACTACCTGTTGATCAAGGGGAGAATTGGCAACAACCTGCTCAGAATCGAAGTAGGAGGAGAGTAGGTGGTGGAAGAGGAAGAGGTGGTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATCTGGACCCTGAACCTTGTGAAGTCTTGCCAGAACCTGTTGCTTTAGGGGCTCCAGAACCTGTTTACAATCACGTGGAGGTAGTGGCAAATAATAATATTGTGATGGAAGGTGGAAGTGCAGATAAGGTGGTGGCAGCTGAAGAAGAACCAAGCACGACTCCTGTCCCCGAGAGGGTACAAGTTGGTAACTCTCCTATATATAAAATAGAAAGGAAATTGGGTAAGGGTGGTTTTGGTCAAGTTTATGTCGGCCGAAGGGTAAGTGGTGGCTCTGACCGAACAGGTCCTGATGCAGTTGAGGTTGCACTCAAGTTTGAGCACAGAAACAGTAAAGGCTGCAATTATGGGCCACCTTATGAGTGGCAGGTTTACAGTACTCTTAATGGCTGTTATGGCATTCCCTGGGTTCATTACAAGGGTAGACAAGGAGATTTCTACATCTTGGTGAGATATGCTTTGATGTTTACTATATTTGCATATGTTGATTTTCTCTTTATGGTCTTAAAGGAAGTCAATATATCTCAGGTCATGGATATGCTTGGGCCCAGTCTATGGGATGTATGGAATTCTCTTGGCCAATCAATGTCACCAAGTATGGTCGCATGTATTGCAGTAGAGGCAATATCAATTCTTGAGAAGCTCCACTTAAAAGGGTTTGTGCACGGAGATGTGAAACCTGAAAACTTTTTGCTTGGTCAACCTGGATCAGCTGATGATAAGAAGTTATATCTAATTGATCTTGGTCTGGCTTCTAGATGGAAGGATGCATCATCTGGTCTACATGTGGACTATGATCAGAGACCTGATATATTCAGGGGAACAATAAGGTATGCTAGTGTACACGCACATTTAGGTAGGACTGGAAGTCGGAGGGACGATCTCGAGTCTCTGGCATACACACTAATATTTCTCATAAAAGGGAGATTACCTTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGGCCACTTCGCCAGAGTTGATGTGTTGCTTTTGTCCTGCTCCATTTAAGCAGTTTCTTGAAGCTGTTACTAATATGAGATTTGATGAGGAGCCTAATTATTCCAAGCTTATATCATTTTTTGAAAGCTTAATTGAACCATGCACTCCATTGAGACCTATTAGAATAGATGGAGCTTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTGATAAACCTGGAAGAAGATGAGCAACCCAAGAAGAAAGTGCGATTGGGAAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTATAATGTTGCAGACACTAGGCTTCGACAACATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTGCAGCAAATCTGTGGGCTCTAATCATGGATGCAGGAACAGGTTTCACTTCACAAGTTTATGAGCTATCACCGGCCTTCCTGCACAAGGATTGGATTATGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATTGCTGGTGCAGTAAATGGAAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTACACGCAGCAGTCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCAATGACTACTGCTGGCAGTCGCTGGGGTGTTGTTATGTCCCGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTCTTATATCCAAGTGAAGGAATCCATCGGCGATGGGAAAATGGTTACCGGATTACTTCTATGGCTGCTACTAGTGATCAGGCAGCCTTCATTCTGAGCATACCAAAGCGCAAATTGCTTGATGAAACGCAGGAGACACTGCGTACATCTGCTTTCCCAAGCACCCATGTCAAGGAAAAATGGGCCAAGAATCTCTACATTGCCTCTATATGTTATGGGCGAACTGTTTGCTAGCTTCTGTAGTGAACATTTGCTGTATCCCCAAAAAATGAGGCAAAATTATAATGATGAGAATATTTTCATGATTATTAAGTTGAATGGGTAAGCTTGCTTTTGATCCCCGGATCCATTCACAAAAAATTACCTCCTACATAAAAATTTGGTTATAATTGTATAAAGAAAGAAAAAGGTAAAGGAGAAAGGCAGAGTTATGCTGGTGAGAGCATGTTGCCCAATCAAACCAACCCTAGCCAATGGGAGCCGTGATCCATTGAAGAGTATTAACGTTACAGGGTTGGCTATTTTGGCATGTTTCGTTCATGGTTGTGCTTTAAACAATTTGCGATTTTGTATGTAATGGTATAAATTTTTACCAACATGAAACTTAAACAATGAATTCTAAGATATATGATTTCTAGATTTGAAAAGAGTAGTTCTTAGCGATCCTGGACTAGTAGTGGTCTGTGGTCGGTACGCACTCTAAACGACATAATAATCAATGGGGGGTCACTTTCTGCAACAAAGGCATTTTCTTCTTGAGTAGTCAGCGTGTGCTGTCGATGTGATTGTGTTTAAAAACTGTTTATGACAGGATGTCCTTTTCCAACAGCTATCTTATTTTTCTTTTTTCACCTTGTTAAGGTACTAGCAATAAAATGATGCGGGCGGCCAGGGTTAGGTGGAACCTACCTACGTTTTGAGTTATAGTTTTATACATGCATTATCAAATGGACCTTAACTATGCAATCTTTTAAGTTGCGCATTACTTTGAT 3299 0.4283 MPPPPFPLPPLRIFRVFLAPSATIFTAIVLAFHPSPIAPRSSSLRCLPDRSYSFKLLTDNNDDGRSYVLVTDKVLGECLEFICVFSGFAIAEDVCYSLGVTKVGYDLNGERMPELRSGARRSKRLGDLQPGPLPVDQGENWQQPAQNRSRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALGAPEPVYNHVEVVANNNIVMEGGSADKVVAAEEEPSTTPVPERVQVGNSPIYKIERKLGKGGFGQVYVGRRVSGGSDRTGPDAVEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVRYALMFTIFAYVDFLFMVLKEVNISQVMDMLGPSLWDVWNSLGQSMSPSMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGSADDKKLYLIDLGLASRWKDASSGLHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFESLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVASAANLWALIMDAGTGFTSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENGYRITSMAATSDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVC 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01889 846 MobiDBLite consensus disorder prediction 116 183 - -
Pste5g01889 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Pste5g01889 846 PANTHER CASEIN KINASE-RELATED 258 810 - -
Pste5g01889 846 Gene3D Transferase(Phosphotransferase) domain 1 228 602 - -
Pste5g01889 846 ProSiteProfiles Protein kinase domain profile. 258 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01889 846 CDD STKc_CK1 258 559 - -
Pste5g01889 846 SUPERFAMILY Protein kinase-like (PK-like) 258 573 IPR011009 -
Pste5g01889 846 SMART serkin_6 258 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01889 846 ProSitePatterns Protein kinases ATP-binding region signature. 264 295 IPR017441 GO:0005524
Pste5g01889 846 Pfam Protein kinase domain 360 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01889 Pste-Chr5 11933454 11940486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01889 363 565 EF-hand Containing Proteins AT2G46700 25.000 2.03e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pste5g01889 Pkinase 3.1e-11 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01889 5 11933454 11940486 Pste5g01889 5 11933454 11940486 ECH