Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01855 ATGTTTATGACACCCATCGACAACTACAATATGCAAAGCCATGCATGCCCATTGCCCAATATCTCTGCTGTCACTCTTATCACATTCCCATTATTTACCTCTATTATTGCCTTCACTCACCAATACTCGTGTCTTTACATAAGCATAGCACGGATTTCAGTCAGAAAAGTTGTGAAGATGGAATTGCCTGATACAATCTATACACCCATGTACAAAGGGAGATTCTGCACCAGTGCTGGAGTTAAGGCTCAGCTTGGATATGTTGAAACTGATACATCTGGTCGATATGGCCGTTTCAGAGATGTTCTGGGCAAAGGAGCAATGAAGACTGTGTATAGGGCATTTGATGAATTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTCGGTGATGTCTTTCACTCACCAGAGCAACTTCAGCGCCTGTATTCAGAGGTTCATCTCCTTAAGCATCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAATAACAGAACTTTCAACTTCATCACTGAATTGTTCACCTCCGGCACACTTAGAGAGTATAGACAGAAGTATAAGCGAGTAGACATCAGAGCAGTTAAGATTTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTAATCCATAGAGACCTTAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGCGGCTCAAGATTGGTGACTTAGGCCTCGCAGCTATACTTCGAAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTCTATGAAGAGAAATACAACGAGCTGGTAGATATATACTCCTTTGGTATGTGCATGATAGAGATGCTTACTTTTGAGTTCCCATACAGTGAGTGCGCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCTGAAGCATTTTACAGAATCCCAGATTTGGAAGCCCAGAAGTTTGTAGGAAAATGTTTGGCAAATGTCTCAGAGAGACCATCAGCCAAGGAGCTCTTGATGGATCCTTTTTTAGCCACGGACCAACTTGAAATACCATTGCCACCAAACATACCGTTACCTCCAAATCAAACTCTAAAGATTAATTCCACTGCAACAGTTCCCAGTGAGCATCATTGTGATCAAACAAAGAGTGCGGATATGACAATCACTGGGTCAATAAACGAAAAGGACAACACTGTTCACCTCAAAGACACGGCTATTCAGGTGGCCATGGAGATGGTACAAGAACTAGAGATTAGCCACTTGGAACCGTTGGAGATTGCTGCAATGATAGATCATGAGGTATCAGCTTTAGTTCCAACTTGGAGGGACAAGGTCAAGTGTCACCACCAACGGCAGTACAGCTTTAACTACGAAGAAGATGATGATGTCAATAACCATCACCCTTTCTTCTTGCCATCTTCTCCTTCCTCTCCTCGTGGTTCTGGCCTCATGTCTGCTTCCAACTCCTTCAAGATCCATGCTCGTGGGAACCATATTTACCCGTTCGCTCAAGAATGGTCTCAAGTCTTGGGAGATGATCCGTTCATGAACGACGACGCAAGCTCTCAAGCATCAATGAACTCTTTCAAGTGTTCCAGTTTCCAGTTCCGCGACCCGGGTCAGGAGGAGGAGCACGCCCCAACAACAGATGGACCCGAGCTCAACAAGTGCCCGACATTATCGTACAGAGTGGAAGAACCAGAAGCCATCTTCGGCAAACCCTTTTTGTACCCGCCCAGGTTGGACAGTTCGTGCGGTTGCACATTCGGGTCGAGCCACGGGTGCCCGAGGCTGACGAGGATCCGTTCCTGCCCCCACGAGAGGAGGAGCCAGCAGCTTCAGCGGTCCCTCATGTTGGAGGAGATTTACAAGTACAAGAGACGCTTCTTCAACACTGTTGGCGCCTTTGAGAACATCGGGTTTCGGCATCCTCAAAGAGCTGGATGCTTTCGACATCCTCTGTAGATTAACAATTAAGAGACTCTTCTTTATGTTAAAGATGTCTCATATATCTGTATAATTAATCTATACACATGTTTCATCAGACCACCTGGCTTGTTTTTCTTAAATTCTGC 2111 0.4543 MFMTPIDNYNMQSHACPLPNISAVTLITFPLFTSIIAFTHQYSCLYISIARISVRKVVKMELPDTIYTPMYKGRFCTSAGVKAQLGYVETDTSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYKRVDIRAVKIWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRLKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTFEFPYSECANPAQIYKKVTSGKLPEAFYRIPDLEAQKFVGKCLANVSERPSAKELLMDPFLATDQLEIPLPPNIPLPPNQTLKINSTATVPSEHHCDQTKSADMTITGSINEKDNTVHLKDTAIQVAMEMVQELEISHLEPLEIAAMIDHEVSALVPTWRDKVKCHHQRQYSFNYEEDDDVNNHHPFFLPSSPSSPRGSGLMSASNSFKIHARGNHIYPFAQEWSQVLGDDPFMNDDASSQASMNSFKCSSFQFRDPGQEEEHAPTTDGPELNKCPTLSYRVEEPEAIFGKPFLYPPRLDSSCGCTFGSSHGCPRLTRIRSCPHERRSQQLQRSLMLEEIYKYKRRFFNTVGAFENIGFRHPQRAGCFRHPL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01855 666 FunFam probable serine/threonine-protein kinase WNK9 180 360 - -
Pste5g01855 666 FunFam Probable serine/threonine-protein kinase WNK1 82 178 - -
Pste5g01855 666 ProSiteProfiles Protein kinase domain profile. 97 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01855 666 Gene3D Phosphorylase Kinase; domain 1 81 178 - -
Pste5g01855 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Pste5g01855 666 Gene3D Transferase(Phosphotransferase) domain 1 180 361 - -
Pste5g01855 666 SUPERFAMILY Protein kinase-like (PK-like) 99 397 IPR011009 -
Pste5g01855 666 CDD STKc_WNK 95 355 - -
Pste5g01855 666 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 85 545 - -
Pste5g01855 666 SMART serkin_6 97 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01855 666 Pfam Protein kinase domain 101 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01855 Pste-Chr5 11726264 11732875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01855 78 474 MAP Kinase Kinase Kinase AT3G51630 64.133 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pste5g01855 Pkinase 6e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01855 5 11726264 11732875 Pste5g01855 5 11726264 11732875 ECH
Pste5g01855 5 11726264 11732875 Pste6g00295 6 990812 996702 PCT