LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g01848	ATGAATAGCTCCGACACGCTGCAGGTGTGTTTCAATAGAACTACAAATCATGGTTCCTCCCTTTGGATAGAAAATTCTGTGGAAAGAACTCTCCCTCCATTTGCTTTGCAATTGGCAATTACCCTATCACTCAACCGCATTTTGCTCCTTGTTTCACAACTTTACCATGTACCCCCTATTGTTGCCCATATTTTTGCTGGTTTTTTGTTAGGTCCATCTGTTCTGGGACGTTGGAATGGTTTTTTCAAAAGCATTTTTCCGATTGGTAGCTTGACGCCATTGGAGACTATCGGAGGGTTGATCCTTGTTTACTACGTGTTCTTGGTGGGTCTAGAAATAGACTTGAAACCAATAACGAGGTTGCACAAGAAGGGCATAATTTTTGCCATGGCATGCTCGATCTTCACCTTACCAATTGGGTTTTGCTTGTACCATATGCTTGTCACTGACATGGGACGCAAATCTTTGTCCCATGTTAACGTTAGACCAAAGGGTGCAATATTATGGGGAATCACCCTTTCTTGCAGCAGTGAGTTTCCTGAGATTGCAAAGATCCTTTCAGACCTAAAGCTTCTCCTCACAGACAATGGACAACTAGCTCTCACTACTTCTCTCATCAATGACTTGTTTTCATGGTGCCTTCTTGTGTTGGCTCTAACACAATTCTATTACTCTTCCGTGGCATCGTTTGTGATCAGTGTGGTGATTGTTTCGGTGTGTTTTCTGGCACTTCGCCCCTTCTTCAAGTGGCTATTCAGCAATGAGGGCATGAGGGATCGTGAGTTCCTTGAGTCACAAGTATTGTTTGTGCTGCACTTAGTTTTGGTCGTTGGGTTTTTCACCGATGGGTTCGGTGTGCATTCAATTACTGGGGCTTTCTTTTTGGGTGTTGTGATCCCTCAGGGGGCGCTTAACAATGCGGTGCTGGAAAGGGTGCATGAGTTTGTAGTATCGTTCATGATGCCTTTGTACTTTCTGGCTGTTGGAGAGAGAATTAAGATCCAAGACTTGGCCTTGGACACGCATGGTTCAACTGTCGTGGTGGTTATTGTGTTGGCCTTGGTGGCCAAGATTGTATGCATTATGGTGGTCTCTTGGTGCTACCACATGCCAACCGTTGAAGGATTCTCCCTTGCACTGCTCATGAATACTAAAGGAATTATGCCATTGATCATTCTCTCCACCGGCAGAGACAGGCTCGAACTAGACAACCAATCCTTTGGAGTGATGCTAGTAGCATGCTGGTTGATGACAATTCCCATGGGACTAGTCTCAGCAGCTTTAACAAAAGCCTTGAAGCCAAGAAAGTCTCTGGGAGGCCAACGCAAGAGCAAGCAAGAGACACAGCCAGACTCACCCCTCAGACTCTTAGCCTGCATCCACTCAAAGCGCGACGCCAACGTGATTATCAACCTCTTAAAAGCCTCGAGTCCCTCAGTGAGAACCCCAATCCAAGTTCTAGCAGTGGAACTAAACAAAATGACCAACCGCCCCACCTCATCACTCATCATAAGAGACGCTAAAAAACCATCCTTCACCTCAAAATCCACAAAACTAGACACCGAAGACACCCTTGGCTGCTTCGACAACCTTACCCAAGCCATCTTCGCAGAGAAAATGAGAATCATCTCAGAGTACAATTCCATGCACAAGGACATCTTAAACCTTGCAGGACGCAGAGGGGTGTCACTTATCTTAACCACACTCTACAAGCAACCAACCTACGATGGTTTAGGAGCTGGTGCTGCCACTGCAAGAGCTGTTAACATCATCAACCGCGACCATGCAAGCAAAGACGAGAAGAAAGTGGTGTTGGAGAGTCTGGTGAAGAATGCACCGTGTTGTGTGGCAATACTTGTGGACAGAGAGATGAATCAAAAGCGTTCAAAGGAGCAACGTGTGGCAATGTTATACATTGCAGGTGCTGATGATCGTGAAGCGCTTTCTTATGCATGGAGGATGAGTAGGAGTGTGGAGGTGAAGTTAACGGTGGTGAGGCTTGTTTGGGAGAGCCCTAATGATGAGTTTGATGAAACGGATAAGGAGTTTATAAAGGGGTTTGTGCAACAAACGAGGGTGAGGTATTTGGAGAAGGTGGTGAAGGATGAGAAGGAAACGGTGAAGCTTTTGAATAAGATAGGGAACAAAGGGTTTGATTTGTTTGTGGTGGGAAGAGGGCATGGGAGGAAGATGTCTTTGGCACAAACGGTGGATCCTGTTTTGGAGGAACCTGTGTTGGGGCCACTTGGGGATACTTTGTCTGATTTGAACTCTGCAGCTGACACCTCTATTTTGATTTTTCAAAGACAGGCACCTGATCCTGTTGAAGGGAATAAGCATGTGAGGTCTCCTTCTTCTTATGACAAACTGTTTGATACCATGATGGACCAGCAGCTCATGTGCCCTTCAACGGGCTTTCCAATGCTTTTTAGTCATTATGCTTGA	2445	0.4577	MNSSDTLQVCFNRTTNHGSSLWIENSVERTLPPFALQLAITLSLNRILLLVSQLYHVPPIVAHIFAGFLLGPSVLGRWNGFFKSIFPIGSLTPLETIGGLILVYYVFLVGLEIDLKPITRLHKKGIIFAMACSIFTLPIGFCLYHMLVTDMGRKSLSHVNVRPKGAILWGITLSCSSEFPEIAKILSDLKLLLTDNGQLALTTSLINDLFSWCLLVLALTQFYYSSVASFVISVVIVSVCFLALRPFFKWLFSNEGMRDREFLESQVLFVLHLVLVVGFFTDGFGVHSITGAFFLGVVIPQGALNNAVLERVHEFVVSFMMPLYFLAVGERIKIQDLALDTHGSTVVVVIVLALVAKIVCIMVVSWCYHMPTVEGFSLALLMNTKGIMPLIILSTGRDRLELDNQSFGVMLVACWLMTIPMGLVSAALTKALKPRKSLGGQRKSKQETQPDSPLRLLACIHSKRDANVIINLLKASSPSVRTPIQVLAVELNKMTNRPTSSLIIRDAKKPSFTSKSTKLDTEDTLGCFDNLTQAIFAEKMRIISEYNSMHKDILNLAGRRGVSLILTTLYKQPTYDGLGAGAATARAVNIINRDHASKDEKKVVLESLVKNAPCCVAILVDREMNQKRSKEQRVAMLYIAGADDREALSYAWRMSRSVEVKLTVVRLVWESPNDEFDETDKEFIKGFVQQTRVRYLEKVVKDEKETVKLLNKIGNKGFDLFVVGRGHGRKMSLAQTVDPVLEEPVLGPLGDTLSDLNSAADTSILIFQRQAPDPVEGNKHVRSPSSYDKLFDTMMDQQLMCPSTGFPMLFSHYA	814

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g01848	814	PANTHER	CATION/H + ANTIPORTER	13	770	-	-
	Pste5g01848	814	Gene3D	-	590	746	-	-
	Pste5g01848	814	Pfam	Sodium/hydrogen exchanger family	42	423	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Pste5g01848	814	Gene3D	-	33	437	IPR038770	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g01848	Pste-Chr5	11682537	11686236	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g01848	3	769	Antiporter Super Family	AT2G13620	31.404	9.78e-127	397