Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01834 GTGACCAACCCAAGTGGCAAGGTCTCAATATTAGCAGAAACAGCTGGTCCTGTAATTCAAACTATCCTCTCTTAGCATTTGGCAAGATCTGATTTCCCTCTTCACAAGGAGAGATAAAGCTATAGTTTTGGTGCAGGTGTGATCTTCAAGTTCCAATCTTTTTGTTGAGAGAGAGACAGGGTCAGAAAAATATTTGAGATCTGTCACTTTGTTCCAGTTCAGAGGATCAGATTAAGGTATGCCAAGAAAATGGGGAGGAAGGGAAATTGGTTTTCTAGCGTGAAGAAAGCTCTCAGTCCAGACCCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAAACTTCAGTCTCATACCCAGAAGCTGATAAAGCACCACCACCTATTCCTCCACCTGATGAAATTAAATTAACTGATATTGAAAATGAAATCAGTCATGATTATGATCATGTTGTTGAAGTTGCAACTGCCATGGAAGCTGAGGAACCTGTTCCTTCTGTTCAGATAGAACCTGTTAGGGTTGAAACTGCTCAAATTGCTCGTTTTGCCGGTAAATCAAAGGATGAAGTGGCAGCAATCAGAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCTTTGCGGGCCTTAAGGGGGCTGGTCAGGTTGAAATTATTGATGGAAGGGTCGGTTGTAAAACGCCAAGCCACAAGTACCCTCCGCTCTATGCAGACATTATCTCGCTTGCAGTCTCAGATACGTTCCAGGAGGATCAGAATGTTAGAGGAAAATCAAGCTCTGCAGAAACAGCTCTTACAGAAGCATGCGAGAGAGCTTGAGAGCTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCCAAAGAACAAATAGAAGCCAAGTTACTAAGCAAGTATGAGGCTACTATGAGAAGAGAAAGAGCACTGGCTTATGCATTCACTCATCAGCAAAATTGGAAGAACTCATCCAGATCTGTAAATCCAATGTTCATGGATCCAACCAATCCAACTTGGGGCTGGAGCTGGTTGGAACGATGGATGGCGGCCCGGCCTTGGGAGAGCCGTAGCCATACAGATAAAGAGGTAAATGACCATTCATCAGTAAGAAGCTCCAGTCGTGGCATTACTGGTGGAGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCAGAAAAGCACACTTCTCCAACAGCCAGCCAGAATCCTGGCTCGCCTAGCTTTCAGTCCACTCCTTCCAAGCCAGCTTCATCATCTGCTAAGAAACCAAAGAGAGTAAGTCCAAGGGGTAGCTGGATTACGGATGATGACTCCAAAAGCTTGGTCAGCGTTCAGTCAGAGAGGTTCCGGAGGCACTCCATTGCCGGTTCATCAGTGAGAGATGACGAGAGCCTTGCTAGCTCTCCGGCAGTTCCAAGTTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAGAGTCCATTGGCCCCAGAAAATGGAAAAGCAGAGAAAGGATCCTTTGGCAGTGCAAAGAAGCGGCTTTCATTCCCTGCCTCACCTGCCAGGCCAAGGCGCCATTCAGGCCCACCAAAGGTAGAAAGCAGCAGCTTAAATGCAGAGTTAGCTGTGGACAAGGGTGTGGACAGTTGATCATACAAGTAAAAGGAGGGAAAGCACTAAAGTAGGATTGAGCATATCACTGAAGAAATAAAACGTAAAGAGTTTATTTAAATTGAGTGTTTCATTTATTTATTTTTCATATCTTTATGTCTATCCTAACGTTTCTTGGAGGCTTTTGATTTGGGGTGAAAATTGTTTTACTTACTATATTTATTAATTTGTATTTTTATTTACTTTCACACTTTTTGCACTGAGGAGAGGAAATGTGGTTCATGAATCATTATGGGTCAAATGACAGAATGACAAATGAACTGTCCGAATCTTTCAGTGCTTCCTCAACCAAGGACAAGTATGAAGTATATCATTCTGGTCAAAGTTCTTCATTCTTAATTCTTAGTTGTGATGTAAATGTAAATTTTTAATTTGAT 2069 0.4277 MGRKGNWFSSVKKALSPDPKEKKDQKSSKSKKKWFGKQKLETSVSYPEADKAPPPIPPPDEIKLTDIENEISHDYDHVVEVATAMEAEEPVPSVQIEPVRVETAQIARFAGKSKDEVAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQKQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNWKNSSRSVNPMFMDPTNPTWGWSWLERWMAARPWESRSHTDKEVNDHSSVRSSSRGITGGEISKSFARFQLNSEKHTSPTASQNPGSPSFQSTPSKPASSSAKKPKRVSPRGSWITDDDSKSLVSVQSERFRRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLAPENGKAEKGSFGSAKKRLSFPASPARPRRHSGPPKVESSSLNAELAVDKGVDS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01834 473 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Pste5g01834 473 PANTHER IQ-DOMAIN 5-RELATED 1 455 - -
Pste5g01834 473 MobiDBLite consensus disorder prediction 1 58 - -
Pste5g01834 473 SMART iq_5 114 136 IPR000048 GO:0005515
Pste5g01834 473 MobiDBLite consensus disorder prediction 320 348 - -
Pste5g01834 473 MobiDBLite consensus disorder prediction 399 420 - -
Pste5g01834 473 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Pste5g01834 473 MobiDBLite consensus disorder prediction 283 305 - -
Pste5g01834 473 MobiDBLite consensus disorder prediction 320 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01834 Pste-Chr5 11589104 11593944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01834 1 461 IQD Protein Family AT5G03040 54.237 1.02e-156 451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01834 5 11589104 11593944 Pste5g01834 5 11589104 11593944 ECH
Pste5g01834 5 11589104 11593944 Pste4g02289 4 16464156 16467723 PCT