Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01816 ATCGAACTAACCACACTTCACACAACTCAAACACCATTATTTATGCTTTTCTCTCTCCCACACTTCCCACTCTTCACTCTTCAACTCAATTCTTACTCACTCTGTCTCTGTCCCTCTTCCATTAATGGCTTCTCTTACCTCGAGGCCTTCTTTATTATAGTCCTTGGGTCCCTTTCGCCGCTTTCCCTGGGAATCAAAATCAATACTATCCAAATTTAGCTTCTTTTCAAATTTCACTCCATACCTTCTACAAAAAATTATTTTTTTCCCACCCTTTGTTTTGTTTTCTGCTCGTCAAATTTCATTAGTGAGAACACATTCCTTCTCTCAGTACTCTGTGCGTGAGTGTTCTTGGATGAAGTGATTTTGAAATTCTGAACAGTAAAAAGAAAAGCCAAAAGAGAATTTCCTGAAGTTGCTTTAATTTGTTTTTCTCTTTTTCATCCTCAAATGGCTTTTGTCTAATTTTTTTATATATTTATTTCTTTCTTTCTTTCTTTTCCCCTCTTTTGTTTCTTTCTACTCCTTCCTTTTTGTTTATATCCACTGAGATTTGGATACTTGCCACTTCTGTTTCCATTCCATGTCCTTTTTCTAAGCTACTGTTCCTCGTGCTAAGAAGAAACTTCCTCTTCTATTTGTAAGGTATGGTTTGGTTTGGTGGTGCATGTGTTGCCCTTTGTTAGGACCTACCAACCTTTTCTACCGTATATACAACCAGATGATAATAGAGTTGTTCTTGTTAAGGGGTAAAATTTTGTTTAAATTTGAACACTTCTCTTCATAGGATCAATCTATAAATCTATAAATATGATGCAATTCAGCATGTGTGTGTTATTTGTGATTCTTCTTGCGTCGGTTGTGTTGGTGTTTTCTGTGGACCCTGGTTTCAATGACGATGTGCTGGGGTTGATTGTGTTCAAGGCTGGTTTGGAGGACCCTAAAAAGAAACTCTCTTCTTGGAATGAGGATGATAGCAGTCCTTGCAACTGGGAAGGTGTGAAGTGTGATCCTTTATCCAATAGGGTCACTGCTCTTGTCCTTGATGGGTTCTCTCTTTCTGGGCATGTTGACAGGGGCCTATTGAGGTTGCAGTCCCTTCAAATTCTCTCACTTTCTCGGAACAATTTCACTGGGCCTATAAACCCTGATCTTCCTCGCCTTGGGAGTTTGCAGGTTGTGGAGTTGAGTGACAACAATCTCTCTGGGGAGATCCCAGAAGAGTTTTTCCAACAATGTGGTTCTCTCAGGACAGTTTCATTTGCCAAGAACAACCTCACAGGTAAGATTCCTGAGTCCTTGAGCTCATGCTCCAATTTGGCAACTGTTAACTTCTCCTCTAATCAACTCCATGGGGAATTGGTTAATGGGGTGTGGTTCTTGAGGGGGTTGCAGTCACTTGATCTGTCAAATAACTTGCTGGAGGGGGTGATTCCTGAAGGGATTCAGAATTTGTATGATATGAGGGAGTTGAGTCTTCAGAGGAACAGGTTTAGTGGAAGGCTTCCTGGGGATATCGGAGGTTGCATACTTTTGAAATCACTTGACTTGAGTGGTAATTTTCTCTCTGGAGAACTTCCTCACTCAATGCAAAGACTCACTTCATGCACATCACTTAGTTTACAGGGAAATTCATTCACCGGAAGAGTTCCTGACTGGATTGGAGAATTGAAGAATCTAGAGGTGTTGGATCTTTCTGCCAATGAATTCTCTGGTTGGATTCCAAAGTCATTAGGGAATCTTGACTCTTTGCATATATTGAATTTGTCCAGGAATCAGTTGACAGGAAACTTGCCGGATTCTATGGTGAACTGCACTAAACTTTTGGCTCTTGACATTAGCCACAATCAGTTGGCAGGCCATGTTCCTTCATGGATTTTTAGGATGGGTGTGCAAAGTATCTCTCTTTCTGGGAATAGCTTCAGCAAGGGCAATTATCCTTCACTTAAGTCCACACCTGCATCTTATCATGGTCTTGAGGTTTTGGATTTGTCATTCAATGCATTTTCTGGGGAGCTTCCATCTGGCATTGGGGGACTTAGCAGCCTGCAGGTCTTGAACATTTCCACCAACAATATCACTGGCTCTATACCTATGGGTATAGGAGAGCTTAAGTCTTTGTACGTTATTGACCTAAGTAACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAGGGGGCAATTTCACTTACCGAGTTAAGGCTGCAAAAGAATTTCCTAGGTGGGAGAATTCCAGCCCAAATTGACAAGTGTTCATCTCTAACATTTTTGATTCTTTCTCATAACAAGCTTACTGGTTCAATCCCTGCAGCCATTGCAAACCTCACCAATCTTCAGAATGTAGATTTGTCATGGAATGATCTCTCTGGTAGTTTACCCAAGGAGTTAATAAATCTTTCCCATCTTTTCTCATTTAATGTATCCAACAACCACCTTGAAGGTGAACTACCTGTGGGTGGCTTCTTCAACACCATCTCTTCCTCATCTGTCTCTGGTAACCGATTGCTCTGTGGTTCTGTCGTCAACCATTCATGCCCATCTGTTCATCCAAAACCTATTGTCCTAAACCCCAATTCTTCTGGTTCCAATTCCAGCATTTCCTCGCAGAACCATCGGCATAAGATCATACTAAGTATCTCTGCTCTTATTGCTATTGGAGCAGCTGCTTTTATTGCCATTGGTGTGGTGGCTGTTACTGTCCTAAATATCCATGTGCGTTCTTCAATGGAACGTACAACTGCTCCATTTGCATTTTCTGGTGGTGAGGACTACTGCGGTTCGCCTGCAAATGATCCAAACTATGGCAAGCTTGTCATGTTTACTGGTGATGCTGACTTTGCTGATGGAGCACATAATCTTCTCAATAAAGACAGTGAAATAGGCCGTGGTGGATTTGGAGTTGTTTATCGTACTTTCCTTCGTGATGGTCATGCTGTTGCCATCAAGAAGCTTACAGTCTCCAGTTTGATTAAGTCTCAGGAAGACTTTGAGAGAGAAGTAAAAAAACTTGGAAAGATCAGGCACCCGAATCTTGTGGCACTTGAAGGTTATTATTGGACTGCATCCTTGCAGCTCCTTATTTATGAGTACCTTTCTAGTGGGAGTTTGCATAAACTCCTACATGATGATAACAGCAAAAATGTGTTCTCTTGGCCCCGAAGGTTCAAGATCATTCTTGGCATGGCAAAAGGATTGGCCCATTTGCACCAAATGAACATAATACACTACAATCTTAAGTCAACCAATGTGCTGATTGATTGTTCTGGTGAGCCAAGGGTAGGAGACTTTGGTTTGGTGAAACTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTGGGATACATGGCGCCTGAGTTTGCTTGCCGCACAGTTAAGATAACTGAGAAATGTGACGTGTATGGTTTTGGGATCCTGGTGCTGGAGGTGGTGACAGGAAAGAGGCCTGTGGAGTACATGGAGGATGATGTTGTGGTACTTTGCGACATGGTGAGGGGTGCATTAGAAGAAGGCAAGGTGGAGCAATGTGTTGATGGTAGGCTCCTTGGTAACTTTGCTGCAGAAGAAGCAATTCCTGTGATAAAATTGGGGTTGATTTGTGCATCACAAGTGCCGTCAAACCGTCCTGATATGGCTGAGGTAGTCAACATATTAGAGTTAATCCAATGCTCTTCAGAAGGACAAGAGGAATTAGAATAAGTTTTGTTGCAGTCGGAAACAGCACATATTGCAGTACCTGGTGAAGTACAATCCGGTTAAAAAGCTATATACATGAAAAGAATATTATTCAGTCAATTTCTTCCCATCTTTTGTTTGTCTAAGATGTTGAAATTTTCTTCTTTTTTTGGTCTCTTAAATTTTGTTCATCTCCTAAATGTATTACTGGATTTTTCTTCACCAGTTAGACGGCTGATACAAGGATATATCATATTCATATCTCT 3959 0.412 MMQFSMCVLFVILLASVVLVFSVDPGFNDDVLGLIVFKAGLEDPKKKLSSWNEDDSSPCNWEGVKCDPLSNRVTALVLDGFSLSGHVDRGLLRLQSLQILSLSRNNFTGPINPDLPRLGSLQVVELSDNNLSGEIPEEFFQQCGSLRTVSFAKNNLTGKIPESLSSCSNLATVNFSSNQLHGELVNGVWFLRGLQSLDLSNNLLEGVIPEGIQNLYDMRELSLQRNRFSGRLPGDIGGCILLKSLDLSGNFLSGELPHSMQRLTSCTSLSLQGNSFTGRVPDWIGELKNLEVLDLSANEFSGWIPKSLGNLDSLHILNLSRNQLTGNLPDSMVNCTKLLALDISHNQLAGHVPSWIFRMGVQSISLSGNSFSKGNYPSLKSTPASYHGLEVLDLSFNAFSGELPSGIGGLSSLQVLNISTNNITGSIPMGIGELKSLYVIDLSNNKLNGSIPSEIEGAISLTELRLQKNFLGGRIPAQIDKCSSLTFLILSHNKLTGSIPAAIANLTNLQNVDLSWNDLSGSLPKELINLSHLFSFNVSNNHLEGELPVGGFFNTISSSSVSGNRLLCGSVVNHSCPSVHPKPIVLNPNSSGSNSSISSQNHRHKIILSISALIAIGAAAFIAIGVVAVTVLNIHVRSSMERTTAPFAFSGGEDYCGSPANDPNYGKLVMFTGDADFADGAHNLLNKDSEIGRGGFGVVYRTFLRDGHAVAIKKLTVSSLIKSQEDFEREVKKLGKIRHPNLVALEGYYWTASLQLLIYEYLSSGSLHKLLHDDNSKNVFSWPRRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPRVGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCSSEGQEELE 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01816 968 SUPERFAMILY RNI-like 256 554 - -
Pste5g01816 968 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pste5g01816 968 ProSiteProfiles Protein kinase domain profile. 685 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01816 968 PRINTS Leucine-rich repeat signature 434 447 - -
Pste5g01816 968 PRINTS Leucine-rich repeat signature 194 207 - -
Pste5g01816 968 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 30 954 - -
Pste5g01816 968 SUPERFAMILY RNI-like 71 350 - -
Pste5g01816 968 Pfam Leucine rich repeat 460 519 IPR001611 GO:0005515
Pste5g01816 968 Pfam Leucine rich repeat 388 447 IPR001611 GO:0005515
Pste5g01816 968 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Pste5g01816 968 Gene3D Ribonuclease Inhibitor 308 582 IPR032675 -
Pste5g01816 968 Gene3D Phosphorylase Kinase; domain 1 675 761 - -
Pste5g01816 968 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 28 306 - -
Pste5g01816 968 Gene3D Transferase(Phosphotransferase) domain 1 762 967 - -
Pste5g01816 968 SMART LRR_typ_2 118 142 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 311 335 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 287 310 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 530 554 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 434 458 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 215 239 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 506 529 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 386 410 IPR003591 -
Pste5g01816 968 SMART LRR_typ_2 191 214 IPR003591 -
Pste5g01816 968 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 307 580 - -
Pste5g01816 968 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515
Pste5g01816 968 Pfam Leucine Rich Repeat 242 262 IPR001611 GO:0005515
Pste5g01816 968 Gene3D Ribonuclease Inhibitor 28 307 IPR032675 -
Pste5g01816 968 SMART LRR_sd22_2 287 313 - -
Pste5g01816 968 SMART LRR_sd22_2 434 457 - -
Pste5g01816 968 SMART LRR_sd22_2 506 532 - -
Pste5g01816 968 SMART LRR_sd22_2 191 217 - -
Pste5g01816 968 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 762 963 - -
Pste5g01816 968 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 679 761 - -
Pste5g01816 968 CDD STKc_IRAK 691 957 - -
Pste5g01816 968 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Pste5g01816 968 Pfam Protein kinase domain 686 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01816 968 SUPERFAMILY Protein kinase-like (PK-like) 686 957 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01816 Pste-Chr5 11501969 11506208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01816 4 967 Receptor kinase-like Gene Family AT3G56370 61.546 0.0 1138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pste5g01816 Pkinase 9.2e-41 CL0016