Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01812 CTCTCTTGTGTTTTTTAATCTCACTCACAACTCTTCACTCTTCTCCCTGCATGAAATTCCCTCGCATTGTTTACACGGTTGGGTCACTCACTCACACACACACACACACACGCATTTCACAAATGATGTGAACCCGTTGCCTCAGCAAATTGATCCCTCCTTGGCTTCGTCTTGTAACTAACTTTACTTTCCCTCCAAACCGTCTCTAACAGACTCTAACAAACTCAACAGAGGAGATGCTGGATCTCAACCTCAACGCCGATTCCGCCTCCGACACACCGCCGCTCTCCGCTGCTCAAATGGAGAGTTCCGGCAGCTTCAATTCTTCCATCGTCAATGCCGCCGACACCGAAGACTCCTGCTCCTACGGCGAAGCCGTCGCCTACAACTTCGCAATACTCAACAACAACACCGCCACTGTCGACGACGCCGCCACTTCCGGTGGACTGCCACTCGCGACCGCAGCAGAGTCTTCCGTTCGTACCATACAGCTTTTTCCGGCCAACCAATCGGGAGTCTCGCCGTCGTGGTTGGATTTCTCCTCGAAGGTGGATCAACACCCGGAACAGAGGATCATTCCCCGGCAACCGCAGGTGAAGAAGAGCCGCCGCGGACCGAGGTCAAGAAGCTCGCAGTATCGCGGCGTTACTTTCTATCGCAGAACCGGAAGATGGGAATCGCACATTTGGGATTGTGGGAAACAAGTGTACTTGGGTGGATTTGACACAGCGCATGCTGCGGCAAGGGCTTATGATCGAGCTGCGATCAAGTTCCGTGGCGTTGATGCGGATATCAATTTCAACGTTAGCGATTACGATGAAGATATAAAGCAGATGAGTAACTTCACGAAGGAGGAGTTTGTGCATATTTTGCGTCGACAGAGCACTGGTTTTTCAAGGGGAAGCTCCAAATATAGGGGAGTTACTCTGCATAAGTGCGGGCGTTGGGAAGCTCGTATGGGGCAGTTTCTTGGGAAAAAGTATATATATCTTGGGCTATTCGACAGCGAATTAGAGGCTGCAAGAGCGTATGATAGGGCTGCAATAAAATGCAATGGAAGGGAAGCAGTTACAAACTTCGAGCCCAGCCTATATGAAGGGGAGGCAATTTCCCAGTCTGATAATGAAGATAACAAGCAAAGTCTTGATCTTAACTTGGGCATAGCTCCCCCTTCTTATTCCGATGGTCAAACCAAGAACACACCCAGCAACGGGAGTGGTTTGAAAGCTCCACAAAGCTGGCATGATATCCCTGTTGACAATAGAGTTATGTTTGAGCACTCTGGATCAAGATCACTTAATGTTCAGCCTTCTCATGGCTTCTCTATAGCATCTGGGCATCAACCTTCCATCTGGAATGGTAGCAATTTCCTTCCCATCTACAAGGAAACAGCAATAGAGAAGAGGGTGGAAGCTGCTCCAATGCCAAACTGGGCATGGCAAGTTCAAGGTCCTTATGGCGGGGCAACTCTTAATCCACCCTTCTCTACTGCAGCATCATCAGGATTCCCTTCAACAATGATACCATCAGCTGCGGATAGTCAAATTCATTTTCCAAACATGACATTCCTCCACTCACATTTTCCACCACCAATCACCAACTCCGGCACCATATCCCCTTTTTTCTGCGGTAGCTGAATGCATTGCTAGCTAGACCAAAACAATTACAAATCTTCTTGATTTCATACAATGGTTCACAAACTAGTACGACTAGCTTCAATTGAATTACATGGTTCTATAGCTTTTACTATCTGTCCTTTAATATACTAATTTTCTTCAGTGTAAAGAAATGACATGCCTCGAAGGCATGTTGAACTCTACTTTACCGATTTGAGACTATTATAATAAGCATTTACTTTGGTATCCAAC 1868 0.4716 MLDLNLNADSASDTPPLSAAQMESSGSFNSSIVNAADTEDSCSYGEAVAYNFAILNNNTATVDDAATSGGLPLATAAESSVRTIQLFPANQSGVSPSWLDFSSKVDQHPEQRIIPRQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSLYEGEAISQSDNEDNKQSLDLNLGIAPPSYSDGQTKNTPSNGSGLKAPQSWHDIPVDNRVMFEHSGSRSLNVQPSHGFSIASGHQPSIWNGSNFLPIYKETAIEKRVEAAPMPNWAWQVQGPYGGATLNPPFSTAASSGFPSTMIPSAADSQIHFPNMTFLHSHFPPPITNSGTISPFFCGS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01812 466 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 96 318 - -
Pste5g01812 466 FunFam AP2-like ethylene-responsive transcription factor 224 284 - -
Pste5g01812 466 SMART rav1_2 133 195 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 SMART rav1_2 225 288 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 PRINTS Ethylene responsive element binding protein signature 264 284 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 PRINTS Ethylene responsive element binding protein signature 226 237 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 ProSiteProfiles AP2/ERF domain profile. 225 282 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 CDD AP2 133 191 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 MobiDBLite consensus disorder prediction 108 133 - -
Pste5g01812 466 Gene3D AP2/ERF domain 132 191 IPR036955 GO:0003700|GO:0006355
Pste5g01812 466 Gene3D AP2/ERF domain 224 283 IPR036955 GO:0003700|GO:0006355
Pste5g01812 466 MobiDBLite consensus disorder prediction 291 331 - -
Pste5g01812 466 FunFam AP2-like ethylene-responsive transcription factor 132 191 - -
Pste5g01812 466 CDD AP2 224 284 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 SUPERFAMILY DNA-binding domain 132 191 IPR016177 GO:0003677
Pste5g01812 466 MobiDBLite consensus disorder prediction 7 23 - -
Pste5g01812 466 MobiDBLite consensus disorder prediction 291 334 - -
Pste5g01812 466 MobiDBLite consensus disorder prediction 1 23 - -
Pste5g01812 466 Pfam AP2 domain 224 274 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 Pfam AP2 domain 133 181 IPR001471 GO:0003700|GO:0006355
Pste5g01812 466 SUPERFAMILY DNA-binding domain 224 283 IPR016177 GO:0003677
Pste5g01812 466 ProSiteProfiles AP2/ERF domain profile. 133 189 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01812 Pste-Chr5 11447111 11450004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01812 113 308 AP2-EREBP Transcription Factor Family AT4G36920 79.899 3.37e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pste5g01812 AP2 1e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01812 5 11447111 11450004 Pste5g01812 5 11447111 11450004 ECH