Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01809 CTTTTGTATTTTTTCCACATAATAATATAAGGCCTCACCAGAATTTAATAAATATGGTTCAGTTGAGTTGAGTGGCTGTGTGAGTGATAAAACCTTGAGACCACAAACAAGGAACAAGGATCAATTTGTGAGGGAATCAAATCAAAACTTTTCAAGATTGGAACATGGACAACCCTGGTTCTAGTCGTAAGAAAATATTTGAGGAGCTTCTCAGAGGTCATGATTGTGCCAAGAAACTTAGAAGTGTCATAAATGAGAGTTGTGAAGATGGAACCGCAACCCCATTTGCTGAACAACTTGTGAAGGAGGTTCTCATGTCCTTCACCAACTCCCTCTTGTTCTTGAACAACTCCACTTCTGAATCCCATGATGTCTCCAATGTTCTTCAAGTTTGGGACTCTCCCAAATCTGAGGACTCTCAAGAGAGCAACTGCAAGAGCATCACTGTTAAGGAACGAAGAGGTTGTTACAAGAGAAGAAGAAATGAACAGACAAGGGAGAAGGAGTCTGAAGCTCCAATTGAAGATGGCCACCAGTGGAGAAAATATGGCCAGAAAGAGATTCTGCATGCTAAATACCCAAGGAACTACTACAGGTGCACTCATAAATTTGATCAGGGTTGCCAAGCAACAAAACAGGTGCAAAGAGTTCAAGAGGATCCAATTCTTTTCAAGACCACCTACTATGGCCTCCACACTTGCAAGAACTTGGTAAACCCTGAGATCATACTTGACCCCATGTCCCCATGTGCCTCTTCCAAGTTCCTTAGCTTCGACAACTCCTTCCCAACCCCATCAAATCAAGACTGCCCCTTTTTCTCATCTTCTTTCCCATCTTCAGTGAAAAGGGAGTGCAAGGATGAGGTTCCTCCCTCAACTTCCTCCAATGATTACCTCATCTCTTCTGACCTCACTTTTGATAGCTCACCAAGGCATGTCACTACTCTATCATCAACACTTGACTCAGAGTACAAGAGTCTTGACATTTCGGATGTCTTGTATGATCCTGCTCCGCTTGACGATATCTTTGAAATTGAATCCTTCCTTAAATTCAGATGAGGCTTTCCATGTTTTGGTTTGTGATCTTTTTTCTTTCTTTATAAATTTAACTTCAGTGATGGCAGTGAAAGCAAATTGTGTAATATATAATTACTTTTCTTAGATAAATGTAATATTTGTGTTTTTATTGTCAATATTGGCATTTTCAATCAATGAGAAATAACAGTAATGTTTTGAATGGTTTCACCCATCAACCATAGTTAGTCCAATCATTAAGAATGAG 1281 0.3981 MDNPGSSRKKIFEELLRGHDCAKKLRSVINESCEDGTATPFAEQLVKEVLMSFTNSLLFLNNSTSESHDVSNVLQVWDSPKSEDSQESNCKSITVKERRGCYKRRRNEQTREKESEAPIEDGHQWRKYGQKEILHAKYPRNYYRCTHKFDQGCQATKQVQRVQEDPILFKTTYYGLHTCKNLVNPEIILDPMSPCASSKFLSFDNSFPTPSNQDCPFFSSSFPSSVKRECKDEVPPSTSSNDYLISSDLTFDSSPRHVTTLSSTLDSEYKSLDISDVLYDPAPLDDIFEIESFLKFR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01809 297 SMART WRKY_cls 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01809 297 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 211 IPR044810 GO:0003700
Pste5g01809 297 Pfam WRKY DNA -binding domain 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01809 297 Gene3D WRKY domain 102 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g01809 297 SUPERFAMILY WRKY DNA-binding domain 117 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g01809 297 ProSiteProfiles WRKY domain profile. 114 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01809 Pste-Chr5 11436197 11438131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01809 1 179 WRKY Transcription Factor Family AT3G56400 39.785 2.47e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g01809 WRKY 2.7e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01809 5 11436197 11438131 Pste5g01809 5 11436197 11438131 ECH