LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g01807	GCAGAAGGAAGTAAGGGAAAAGCAAGGAATTGGATTGGTATTACTATTGGCTATTGGTGGTTCACCGCTCCTCTCTCTTTCTTTCTCTGCCAACTCCAACTCCAACTCCGATGCACCCTTCCATCTCTCCCTTTCACCCTAACCCAAATCTCAATTTCTGATCTCTCTCTTTCCTTTCCCCCCAACCACATTTCCCTTTCACCAGTTACAATCATATCAAACCATCAGGTATTTGATTCTTTTTTCTTCAATTCCCGTAATTCAGGACCCTAGGTTTTCATTTACGCGGTTATCGATAATGCCTTGGGGGTGATTCCCTCTGCTGTCTTAGATCTCCGTGCTTTTCCTCCTGCACAATGCGGTTGGAGAAGTATTTATGAGTTCCGATGAGAGCTTGCTTCTGGAATCGGATTCTCGACCTGTGATTCATCACCGCCGTGGGAAATCGGGTTCCCGGAGCTACCTTTGCAGCAATGGTTCCTTCACGTCTTCTATGTTCGATGAGGCTCTAGCGGTGAGCTGCGATGTGGATGTGAAGGAGCGAGACAGGGACGTTGTGTTGTCTGCAGATTGTAGTTTCCACACTGCGTCGCTTGGAAATAGTTCTGAGAGGTGTGTTGCTGAGTCCCAGTTTCCGTGGCAGTTTCCTTTGGAATGCCCCCTTCGCGAGCAGAGGGGTTCTGTATCGTGGGCTGCAATGGAACTGCGTGAAGCCGATAGTCGTAGTGTTCCCCCCTTTGAGATATCTGGAGCTTCTTCTCAGGTGCAGGATAGGTTGCATGTTAAATCACAGCGGATTAGGCACAAAAGTGTCCAATTTGATGATACTGCCTTACATGAGGATATTGCAAGGCTGATCTATATCAATGATCCCCGGCGGACTAACGACAAGTATGAGTTCACCGGGAATGAGATCCGTACAAGCAGATACACCTTTGTTACCTTTTTGCCCAAGAATCTCTTCATTCAGTTTCATAGGGTTGCGTATCTGTATTTCCTTGCTATTGCAGCTCTCAATCAGCTTCCTCCTTTGGCTGTGTTTGGGAGGACGGTGTCTCTTTTCCCGCTCTTGTTTGTGCTTTGCGTCACGGCTATTAAGGATGGCTATGAGGATTGGCGGAGGCACAGGTCAGATCGCAATGAGAACAACCGGGAGTCTCTAGTACTTCAGTCCGGTGATTTCAGATCCAAGAGATGGAAGAAAATACAAGCTGGCGAGGTTGTTAAGATCTTTGCAGATGAGACAATTCCTGCTGACATGGTCTTGTTGGGGACTAGTGATCAAAGTGGGCTTGCCTATATTCAGACTATGAATTTGGATGGAGAATCAAATTTGAAGACTAGGTATGCTAGGCAGGAAACTGCTTCAGCTGTTGCATCAGAAGCTTGTGATGTTATTGGGGTAATTAGATGCGAGCAACCAAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGACATAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTACGTGGCTGCCAACTGAAGAACACAGATTGGATAATTGGTGTTGTAGTTTATGCGGGGCAGGAAACAAAAGCAATGTTGAATAGTGCAGCTTCTCCTTCCAAGAGAAGCAGACTGGAAACTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTGGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGAAAAAGATACTTCACAAATGGTCCGGATAATGGAAAGAAATATAAGTATTATGGGATACCAATGGAAGCATTTTTCTCCTTTTTGAGTTCTGTCATAGTGTTTCAGATAATGATACCAATATCTCTGTACATCACAATGGAGTTGGTTCGATTGGGTCAGTCGTACTTCATGATTGAAGACAGGGATATGTATGATGCCAGCTCTGGGTCAAGGTTCCAATGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTGTTTTCAGACAAGACAGGAACACTTACAGAAAACAAAATGGAATTCCGGAGGGCTAGTGTACACGGGAAGAATTATGGGAGCTCCTTGCCTATGGTTGATAATACAGCTGCGGCAGATGTTATTCCTAAACGGAGATGGAAGCTCAAATCTGAAATTGCAGTTGATTCTGAACTGATGACGATGTTGCGGAAAGACTCACATAAAGAAGAAAGAATTGCTGCTCATGAGTTTTTTCTTACGTTAGCTGCTTGTAACACTGTAATCCCTATACTTGGTGATGGTGGATTTTCCAGTCTTGGAACTAATGAATTAAATGAAGATATTAGCCGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCATATGGCTATACTCTTTTTGAACGTACATCTGGACATATTGTTATTGACGTCAACAGTGAGAAACTCAGATTGGACGTATTGGGTCTGCATGAGTTTGACAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGATTCCCTGACAATGCGGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCAGTGAGAATAACAATAACATATGGCAAACAACTCAGAGCCATTTGACTGAATATTCTTCACAAGGTTTGCGCACACTTGTAGTTGCCTCCAGGAATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCAGGTATGAAGAGGCAAGCACTTCATTGACCGACAGAGCTACTAAACTACGACAAACAGCTGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAGGAGGGTGTACCAGAAGCAATTGAAGCTCTAAGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTTTCCTGCAAACTTCTGAGTGGAGATATGCAGCAGATTATTATAAATGGCACTTCAGAGGATGAATGTAGAAATCTTTTGGCTGATGCTAAAGCCAAATATGGTGTGAAGTCTTCTAGTGTGGGGCGTCGGAATCTGAAACACAAGACTGATGCTGGACGTGATGATCTTGATATTCCCAATGGTTCAAAGCCTTTGAACTTCCCTAAATGGAATCCTGGAAATGAAGAAGGAACTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCAACCTTGCGACTTCCTGTAGGGTTGTGCTGTGTTGTCGAGTTGCTCCCTTGCAAAAGGCAGGAATTGTTGATCTGATAAAAAGCCGCACAGAGGATATGACTCTGGCCATAGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGCCACTGGAATTATCAGCGTGTCGGTTATTTGGTTCTGTATAACTTCTACCGCAATGCTGTCTTTGTATTGATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCAGCGTTGACAGATTGGAGTAGTGTTTTCTATTCAGTGATATACACATCTATACCTACTATTATTGTTGGTATTCAGGACAAGGACTTGAGTCATAGGACACTATTGCAGTATCCAAAACTGTATGGTGCAGGTCACAGGCAAGAAGCTTACAACATGCAATTGTTTTGGATCACAATGATGGACACAGTATGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACATATAAGGACAGTTCAATTGATATATGGAGTATGGGCAGTTTGTGGACGATTGCAGTTGTTATCCTTGTAAATGTACACCTTGCTATGGACATCAACCGTTGGGTATTAATTACCCATTTTGCTATCTGGGGATCGATAATCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCAAATTACTGGACTATTTATCATCTGGCAAGGTCCCCTACATATTGGATGACAATTTTGCTTATAATTATTGTTGCATTGCTCCCTCGTTTTACTTGCAAAGTTGTTTATCAAATCTTTTGGCCTTCGGATATCCAGATAGCTAGAGAGGCTGAGTTAATGAGAAAACGGCATGATAATTTGCAGCCAACGCAACAAGTTTCTAGTTAACTCGTGTTACTATCCCGTGTCTTATAGAAACTACAGTGATGTCAATTGAAATTGCTTCCCTTGTATTTGTCAATCACAATGCATTCTTGTGGCAGTTGGTTGTATAAGTGACCAGATGGGGTTCTGAAGCAGATTGCACTGGAGTAAGACAAATGCTTGGCATCCAACATAGTAATAGATTGTGCCACGGGGAAGCACATGCCAAGGCTGGCAAATAGCTTGCCTGGTTTTTCAAAATGCAGCGGGTCAGGTCATGTCAGGAAGGTAAATAGGAGATAGAGATTGGAATAGGCTCAGACCCGGGTATCTGTATCTCAAGCAATTTTATGTGGGTGGAATTTTATCAGTGGCGACTTGATAATATTAATGATCCACGGTTTATAGAAAAGTGTGGGAGAGATTAAAGTGTAACTACGTGTACCATAGTTCTGTAAAAAATCAGGCTTGCAAAACGTCCTTTTACAAGGAGAATGCCTCATGGAAGGACAAAAGTGAAAGGTCCTTTTACAAGGAGAATGCCTCATGGAAGGACAAAAGTGAAAGGAAAGAAAAGGTTATTTTCTCGGTCCCTGCATTCTTTCATCTCTTCCTTCTTGCAATCCTCCCAACCCCCAACTTGAATTGCAGATAGTCCTTTGTTACCAATAATGTGTGGTTTTGATCTTTTTATAAGTTTCCC	4943	0.425	MSSDESLLLESDSRPVIHHRRGKSGSRSYLCSNGSFTSSMFDEALAVSCDVDVKERDRDVVLSADCSFHTASLGNSSERCVAESQFPWQFPLECPLREQRGSVSWAAMELREADSRSVPPFEISGASSQVQDRLHVKSQRIRHKSVQFDDTALHEDIARLIYINDPRRTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKRWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASAVASEACDVIGVIRCEQPNRNIYEFTANMEFNGHKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLETYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHKNQLDTLPYYRKRYFTNGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLPMVDNTAAADVIPKRRWKLKSEIAVDSELMTMLRKDSHKEERIAAHEFFLTLAACNTVIPILGDGGFSSLGTNELNEDISRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNSEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGSENNNNIWQTTQSHLTEYSSQGLRTLVVASRNLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEDECRNLLADAKAKYGVKSSSVGRRNLKHKTDAGRDDLDIPNGSKPLNFPKWNPGNEEGTNAPLALIIDGNSLVYILEKELESELFNLATSCRVVLCCRVAPLQKAGIVDLIKSRTEDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGIQDKDLSHRTLLQYPKLYGAGHRQEAYNMQLFWITMMDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHFAIWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWMTILLIIIVALLPRFTCKVVYQIFWPSDIQIAREAELMRKRHDNLQPTQQVSS	1295

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g01807	1295	Pfam	Phospholipid-translocating ATPase N-terminal	161	226	IPR032631	-
	Pste5g01807	1295	SUPERFAMILY	Metal cation-transporting ATPase, ATP-binding domain N	554	830	IPR023299	GO:0000166
	Pste5g01807	1295	PRINTS	P-type cation-transporting ATPase superfamily signature	1001	1020	-	-
	Pste5g01807	1295	PRINTS	P-type cation-transporting ATPase superfamily signature	548	562	-	-
	Pste5g01807	1295	Gene3D	-	658	796	IPR023299	GO:0000166
	Pste5g01807	1295	Pfam	Phospholipid-translocating P-type ATPase C-terminal	1029	1269	IPR032630	-
	Pste5g01807	1295	NCBIfam	phospholipid-translocating P-type ATPase	175	1276	IPR006539	GO:0000287\|GO:0005524\|GO:0015914\|GO:0016020\|GO:0140326
	Pste5g01807	1295	SUPERFAMILY	Calcium ATPase, transmembrane domain M	175	1268	IPR023298	-
	Pste5g01807	1295	Gene3D	-	234	404	-	-
	Pste5g01807	1295	SUPERFAMILY	HAD-like	535	1045	IPR036412	-

Showing 1 to 10 of 23 entries

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g01807	Pste-Chr5	11419545	11427938	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g01807	138	1278	Primary Pumps ATPases	AT5G04930	57.093	0.0	1336

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste5g01807	5	11419545	11427938	Pste5g01807	5	11419545	11427938	ECH
	Pste5g01807	5	11419545	11427938	Pste7g00048	7	396827	402926	PCT

Showing 1 to 2 of 2 entries