Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01797 ATGAGAGATTTGGTGATCCTAGGCTCCTCCGTGGTAACTCCTTTTCCTTCTTCTTCGACACCCCATCAACACCGGTACCCGCAGAACCACAAGCCCTCTCTCCCAAAGCTGGCTCCTTTGTCTTCCAATTGGAACATTTCATGCGCCCCCATTGCTTCCAAGTTTGTTGAGGATGTCATTATTGATTCTGATGTGGATGCAGAGCTTCTGGCCAGGATGCTTCTTCTGGGAATTCAAGGGAAGAAGGTTGGGAGTGTGGTTGACGCCCTCAACAAAGTGCAGCCTCCTCACGGACTTTCCTTATCTTCTCATCTTAACGCCTCTGCCATGGATATCATTGCAAAGGAGTGTCACCGCTTGCTCTCCTCTGCCCACCTTCTCCAGGCTGTTGAGCTCATGGAGCTTCTCACACGTTTCCAGATATCAATCAGGGAACTTGTTCAGCCGTCCGACATGATTAAACAATGTGTTCTTAGTAGGAACCCAATTTTAGCTGTGAGGTATGCATGTCTTCTTCCCCATGCACCTATATTGTTCTGCAATATTATATCAGAATTTGGCAAAAGAAGGGATTTAATCTCTGCGTTGAAAGCGTATGAGGCATCGAAGAAACACCTGAATACTCCCAATATGTACATATACCGGGCAACAATTGATGCTTGTGGTCTATGTCGTGATTACATGAAATCTAGGTACATATATGAGGATTTGCTTAATCAGAAGATCACTCCAAATATATACGTGTTCAACAGTCTCATGAATGTGAATGCCCATGATCTTAGCTACACATTAAATCTTTATCAAAATATGCAGAGTCTTGGTTTGAAGCCAGATATGACATCTTATAACATCCTACTGAAAGCATGCTGTGTTGCTGGAAGAGTTGATCTGGCTCAAGACATTTATAGGGAACTTAAGCATTTGGAATCAGTGGGACAGCTGAAACTAGACATCTTTACTTACAGCACAATTATAAAGGTCTTTGCAGATGTGAAATTGTGGCAGATGGCTCTAAATATCAAGCAAGACATGCTGTCTGCTGGTGTTTCTCTGAATACTGTTGCATGGTCATCATTAATCAATGCCTGTGCACATGCAGGGCTTGTAGAGCAGGCAATTCAGTTATTTGAGGAAATGATATTGGCTGGATGTGAACCTAATACACAGTGTTTCAACATCATTTTAAATGCATGCGTTGAAGCTTGCCAATATGACAGGGCTTTTCGCTTTTTCAATTCTTGGAAGGGAAAAAAGATGTTAGGGTCGTTTGGTGAAGCCTACAATAGCAATACAGGGCAGGGGAGCATGCATAATGTTACCACTATGCCAAATGGCATTTCTAGTTCACATATCTTGAGTTTTGCTGAGAGATTCCCTTTCACACCAACTACAACAACATACAATATATTACTGAAAGCCTGTGGTACTGATTACTACCATGCTAAAGCATTAATTAGAGAGATGAAAACAGTAGGTCTTTCTCCAAATCAAATAAGCTGGTCAATTTTGATAGATATATGTGGAGCATCAGCAAATGTGGAGGGTGCCATTGAGATTTTAAAAACTATAAGTGATGCTGGAATGAAACCTGATGTTATTGCATATACAACAGCCATTAAGGTCTGTGTTGAAAGTAAGAATTTTAAGCAAGCACTAGCTTTATATGAAGAAATGAAAAGCTATGAGATACATCCAAATTGGGTAACATATAACACACTTCTGAAGGCACGCAGTACATACGGATCCCTACATGAGGTGCAACAATGTCTGGCTATATACCAGGATATGCGAAAGGCAGGGTACAAACCCAATGACTACTACCTGGAAGAACTGATTGAGGAGTGGTGTGAAGGAGTGATACAAGATAACAGAGAGAAGCAAGGAGAATTTTCTTCCAACAATAAATCTGAATTAGAGAGACCCGAAAGTTTACTTCTTGAAAAAATTGCAGCTCACCTGCTAAAGAGGGTAGCTGACATCCTAGCTATTGATGTTCAAGGACTGACTAAGGTAGAAGCTCGATTGGTTGTTCTTGCAGTTCTTCGAATGATCAAAGAGAATTACAGTTTAGGACATTCAGTAAATGATGATATCTTGATCATCATAGGAGCTACTAAAGTAGACGAAAATCCAGCCAAACACATAGTAGAAATGCAAGAGGCAGTTATAGAACTTCTTAGAAACGAGTTGGGGCTTGAAGTTCTTCCAGCTAGAACCAGATTAGCACTAAGTGACACGGCAAAGTTAGAGTATCCTAACTTTTCAAATCTCAACAAAGCACTGCCAGGAGAGAATGCATTACCAGCAACAATTGAGTTTCAGACAAGGAGGCCGGCAGTTCTAGTAAGGTTGAAGATCACCAAAAAATCATTATACAGTTGGTTGCACAGGAAGTAAGCGATAAATAGTTCCATTACAACTTACAGGAATTTTGTACAAATAGTAGATAAGATATGCCATTTTCCCCCTCCCAACCCTGTATATAGTGCATTTGGGTATAGCTGCCTATGTATCTGTACTAAATTAGTGTAACATAATGAATGATGCCTAGTGCCATGGAATCAAATAATGTGCTTAGTTATTCTATGTAATGTATCTGTGTA 2603 0.4049 MRDLVILGSSVVTPFPSSSTPHQHRYPQNHKPSLPKLAPLSSNWNISCAPIASKFVEDVIIDSDVDAELLARMLLLGIQGKKVGSVVDALNKVQPPHGLSLSSHLNASAMDIIAKECHRLLSSAHLLQAVELMELLTRFQISIRELVQPSDMIKQCVLSRNPILAVRYACLLPHAPILFCNIISEFGKRRDLISALKAYEASKKHLNTPNMYIYRATIDACGLCRDYMKSRYIYEDLLNQKITPNIYVFNSLMNVNAHDLSYTLNLYQNMQSLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVGQLKLDIFTYSTIIKVFADVKLWQMALNIKQDMLSAGVSLNTVAWSSLINACAHAGLVEQAIQLFEEMILAGCEPNTQCFNIILNACVEACQYDRAFRFFNSWKGKKMLGSFGEAYNSNTGQGSMHNVTTMPNGISSSHILSFAERFPFTPTTTTYNILLKACGTDYYHAKALIREMKTVGLSPNQISWSILIDICGASANVEGAIEILKTISDAGMKPDVIAYTTAIKVCVESKNFKQALALYEEMKSYEIHPNWVTYNTLLKARSTYGSLHEVQQCLAIYQDMRKAGYKPNDYYLEELIEEWCEGVIQDNREKQGEFSSNNKSELERPESLLLEKIAAHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYSLGHSVNDDILIIIGATKVDENPAKHIVEMQEAVIELLRNELGLEVLPARTRLALSDTAKLEYPNFSNLNKALPGENALPATIEFQTRRPAVLVRLKITKKSLYSWLHRK 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01797 798 Pfam PPR repeat 319 349 IPR002885 -
Pste5g01797 798 Pfam PPR repeat 498 525 IPR002885 -
Pste5g01797 798 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 308 IPR002885 -
Pste5g01797 798 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 566 603 IPR002885 -
Pste5g01797 798 Gene3D Tetratricopeptide repeat domain 178 308 IPR011990 GO:0005515
Pste5g01797 798 Gene3D Tetratricopeptide repeat domain 449 648 IPR011990 GO:0005515
Pste5g01797 798 Gene3D Tetratricopeptide repeat domain 309 448 IPR011990 GO:0005515
Pste5g01797 798 NCBIfam pentatricopeptide repeat 354 388 IPR002885 -
Pste5g01797 798 NCBIfam pentatricopeptide repeat 319 352 IPR002885 -
Pste5g01797 798 NCBIfam pentatricopeptide repeat 281 306 IPR002885 -
Pste5g01797 798 NCBIfam pentatricopeptide repeat 534 567 IPR002885 -
Pste5g01797 798 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Pste5g01797 798 Pfam PPR repeat family 530 576 IPR002885 -
Pste5g01797 798 Pfam PPR repeat family 352 399 IPR002885 -
Pste5g01797 798 Pfam Pentatricopeptide repeat domain 209 255 IPR002885 -
Pste5g01797 798 Pfam PPR repeat 274 304 IPR002885 -
Pste5g01797 798 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 386 IPR002885 -
Pste5g01797 798 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 496 530 IPR002885 -
Pste5g01797 798 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 349 616 - -
Pste5g01797 798 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01797 173 724 Glycosyltransferase AT1G05670 19.277 7.08e-22 99.4