Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01787 TAAAAAACAGAAAATATAAAACAGAAGACACAAACACATGATAAAAGTAAACAGAGAGAGAGAGAGAACAAAGGCTGTTTTCTAAGTTGTTTTGTTGCAGTTAGCTGCCCAAGAACCGTGTGGTCGGGTTGCGTCTGGTCTCTAGAGAGGGATTCGTAGGTTCTTTCTGATCACCGCTGCGTCCATTAAAGAGTAAAGATGGGTTGGATTCCCTGTTCTGGATATTCAGGCACTAAGAACAAGATTGTGAAGATGGAAGTTCAGGATAGTCACGTTGGCCAGATCAAAGCCACCCCAGGAAAGTTGAAGAGGAATTCATCCACAAATTCCAAAGATACATCTAAAAATGGGGGGAACCCTGATCACATTGCAGCACAGACATTCTCATTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGGGCGGAATGTCTTTTGGGAGAGGGTGGCTTTGGTAGAGTATACAAAGGGCGTCTGGAAAGTATTAATCAGGTTGTTGCAATTAAGCAACTTGACCGAAATGGATTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTGCACCATCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCATTAGGCTCCTTGGAAGACCACTTGCATGACATTCCTCCTGGCAAGAAACGACTTGACTGGAACACGCGAATGAAAATAGCTGCTGGGGCCGCAAAGGGATTGGAATATCTACATGACAAAGCTAATCCTCCTGTTATCTACCGTGATTTAAAGTGCTCCAACATTTTGCTTGGTGAAGGATATCACCCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAAAATACTCATGTATCAACAAGGGTCATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACTGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCAATTGACAATTCAAAATCTGCTGGAGAGCAAAATCTTGTTGCATGGGCTAGACCTTTGTTTAAAGATCGAAGAAAGTTTTCACAAATGGCTGATCCAACACTCCAAGGTCAATACCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAGGCTAACATGCGTCCAGTTATAGCTGATGTGGTCACAGCTTTGTCTTACCTTGCTTCCCAGAGATATGATCCCAATACACACACGGTCCAAAACTCTCGCCTTGCTCCTGGTACTCCTCCTAGAACCAGACGAGGGCAATGATATGGTGCTCAATGTTTTGGTGGAATGGTGGGTATAACATAATCTGGAGAAATATTCAAATATTTTACTTAATGGGCTTCTCTACTTCAAGATATAGGTTTATAGATGTTAATATCACTTGTCCTTTGCGGTTTTCTTTCGGTTCAGAGCACAGTTGCAAAAAACCTTATGGAGTTTTTTTTTTCTAGTTCTATTACTCAAAACTGCTCCCATTTCTGTTTGGAGCTAAGATAGTAATTCCTTCTCTCTTTTTTTTTCTCGAAATTATTATTTAAGAGCCAATTGCTGGACTCATAATTCATGTTCCTTCTAGCTAGGCAATGTCCCTTCCTATCTTTATGCTAGCCATGTTGTATAGGTTATTAGGCTAAATGAAAATATGGCTTTTTCAACGAAGTCAGTCTGCGTATATCATCTTGAAAAGTTTACAGATTGGCTATGCATTTACTTTTTTCAGGTGGGTAAGGGTAATTACACATGAACTATCTTCTTC 1834 0.4089 MGWIPCSGYSGTKNKIVKMEVQDSHVGQIKATPGKLKRNSSTNSKDTSKNGGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIPPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPTLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPNTHTVQNSRLAPGTPPRTRRGQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01787 380 MobiDBLite consensus disorder prediction 34 55 - -
Pste5g01787 380 FunFam Serine/threonine-protein kinase PBS1 44 150 - -
Pste5g01787 380 SMART serkin_6 74 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01787 380 Gene3D Phosphorylase Kinase; domain 1 43 150 - -
Pste5g01787 380 Pfam Protein tyrosine and serine/threonine kinase 78 346 IPR001245 GO:0004672|GO:0006468
Pste5g01787 380 MobiDBLite consensus disorder prediction 359 380 - -
Pste5g01787 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pste5g01787 380 ProSiteProfiles Protein kinase domain profile. 74 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01787 380 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Pste5g01787 380 Gene3D Transferase(Phosphotransferase) domain 1 151 369 - -
Pste5g01787 380 MobiDBLite consensus disorder prediction 27 55 - -
Pste5g01787 380 CDD STKc_IRAK 80 348 - -
Pste5g01787 380 SUPERFAMILY Protein kinase-like (PK-like) 56 348 IPR011009 -
Pste5g01787 380 FunFam Serine/threonine-protein kinase PBS1 151 366 - -
Pste5g01787 380 PANTHER OS07G0668900 PROTEIN 35 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01787 Pste-Chr5 11321390 11325031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01787 39 353 Glycoside Hydrolase AT3G07070 69.524 2.17e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste5g01787 PK_Tyr_Ser-Thr 8.5e-46 CL0016