Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01770 AAACAAGTGGAACTATTGAAACCAGACAACCAGTTCAAACCTACTTTGAGTCAACAGCAAGACTTTATGATGCTACAGTCCTACTTTACTACAATACCAATTTTCTTACTCCTACTTGTGTTTCCTCAAACTAAAGCTGATGTACACTCTGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCACTTCATCATGGTCCAAAAGTCAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGCGGGAGTTACATGCAACCGTAATGGCTCCCATGTTCTTTCTGTGAGGCTTCCAGGTGTTGGATTGCGTGGTTCTCTCCCACTAAACACACTTGGTAAGCTTAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGAGGGAACCTTCCAACTGATCTACTTTCCCTTCCTTCTCTACGCTTTATATATCTCCAACACAACAACTTCTCAGGTGAAATTCCTGATTCTCTGCCACCGCGGCTTATCTTTCTTGATTTGTCCTACAACTCTTTCACAGGAAAAATTCCAGCCTCAATCCAAAACTTGACACATTTAATAGGACTCAACCTCCAAAACAACTCTCTCACAGGACCTATTCCTGATGTTAACCTTCCTACCCTTAAGAATTTGGATTTGAGCTTCAACCACCTGAATGGTTCTATTCCTTCAGGTTTCCATAAGTTTCCTGGCTCCTCATTTAGAGGGAACTTTATGTTATGTGGATCACCTTTAAAACAATGTTCTTCGGTTTCCATTACTAGCACATTGTCTCCTCCCACAGTCTCTCAAAGACCAACTGATCTACCAAACAGGAAAATGAGAAAGGGGGGGAAAATAGCAATTGTTGTGGGGGGTGTCACATTACTGATTCTTTCAGGTCTCATAGTAGTGTTCTGCTGTTTCAAGAAAAAAGTTGGTGAGCAAAATGTAGCACCTGCCGAGAAAGGGGAGAAGCTTAAGCAGGACTTTGGGAGTGGTGTGCAAGAACCTGAGAGAAACAAGCTTGTATTCTTTGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCTGAAGTGCTAGGGAAGGGAAGTTGTGGAACAACATATAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTGAAGAGGTTAAAAGAGGTGGCTATGGGGAAAAAAGAATTTGAACAGCAAATGGAGATTGTCCAAAGACTTGATCATCATCCAAATGTGATTCCCCTTCGTGCTTATTACTATTCTAAAGATGAAAAACTAATGGTTTATGACTACTCAACAGCCGGCAGTTTTTCCAAGTTATTGCATGGAACAAGGGAAGCTGGACGAGCTCCACTAGATTGGGATACAAGATTGAAGATCATGGTTGGAGCTGCAAGGGGAATTGCACATATGCACTCAGCCAATGGAAGGAAACTTGTCCATGGCAACATAAAATCATCTAATGTGATTATCTCAATAGATATTCAGGGCTGCATATCAGATTTTGGCCTAACTCCCCTAACTAGTTTCTGTGCCTCCTCGAGAAGTCCAGGCTATGGAGCACCTGAAGTTATTGAAACTAGAAAATCCACTCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTCCTTGAGATGCTAACCGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGTGGTTGATCTTCCAAATTGGGTCCAGTCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATATTGAGCTAATGAGATATCCAGACATAGAAGAAGAACTTGTGCAGATGCTGCAACTAGCAATGGCATGCGTGGCAGTGATGCCTGACACAAGACCCTCAATGGACGAAGTTGTTAGGATAATTGAAGAAATTGGAGCATCCATTTATTAA 1890 0.4206 KQVELLKPDNQFKPTLSQQQDFMMLQSYFTTIPIFLLLLVFPQTKADVHSEKQALLDFAAALHHGPKVNWNSSTSICTSWAGVTCNRNGSHVLSVRLPGVGLRGSLPLNTLGKLNGLISLSLRSNSLRGNLPTDLLSLPSLRFIYLQHNNFSGEIPDSLPPRLIFLDLSYNSFTGKIPASIQNLTHLIGLNLQNNSLTGPIPDVNLPTLKNLDLSFNHLNGSIPSGFHKFPGSSFRGNFMLCGSPLKQCSSVSITSTLSPPTVSQRPTDLPNRKMRKGGKIAIVVGGVTLLILSGLIVVFCCFKKKVGEQNVAPAEKGEKLKQDFGSGVQEPERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLKEVAMGKKEFEQQMEIVQRLDHHPNVIPLRAYYYSKDEKLMVYDYSTAGSFSKLLHGTREAGRAPLDWDTRLKIMVGAARGIAHMHSANGRKLVHGNIKSSNVIISIDIQGCISDFGLTPLTSFCASSRSPGYGAPEVIETRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDEVVDLPNWVQSVVREEWTAEVFDIELMRYPDIEEELVQMLQLAMACVAVMPDTRPSMDEVVRIIEEIGASIY 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01770 629 Gene3D Ribonuclease Inhibitor 49 160 IPR032675 -
Pste5g01770 629 FunFam Probable inactive receptor kinase RLK902 48 205 - -
Pste5g01770 629 PANTHER OS05G0588300 PROTEIN 34 624 - -
Pste5g01770 629 FunFam pollen receptor-like kinase 1 322 429 - -
Pste5g01770 629 Pfam Leucine rich repeat N-terminal domain 50 86 IPR013210 -
Pste5g01770 629 Pfam Protein kinase domain 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01770 629 CDD STKc_IRAK 360 624 - -
Pste5g01770 629 SUPERFAMILY L domain-like 66 231 - -
Pste5g01770 629 Gene3D Transferase(Phosphotransferase) domain 1 431 627 - -
Pste5g01770 629 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 430 627 - -
Pste5g01770 629 Gene3D Ribonuclease Inhibitor 161 251 IPR032675 -
Pste5g01770 629 Gene3D Phosphorylase Kinase; domain 1 321 429 - -
Pste5g01770 629 SUPERFAMILY Protein kinase-like (PK-like) 358 621 IPR011009 -
Pste5g01770 629 ProSiteProfiles Protein kinase domain profile. 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01770 629 Pfam Leucine Rich Repeat 162 184 IPR001611 GO:0005515
Pste5g01770 629 Pfam Leucine Rich Repeat 209 230 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01770 Pste-Chr5 11236184 11238359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01770 46 627 Receptor kinase-like Gene Family AT5G58300 62.203 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste5g01770 Pkinase 1.2e-36 CL0016