Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01769 GAAAATAGGAGGATAAAAGAAAAAAATCATTTTCCCATCACCAAAACAAGTAGAGGAATATAAAATTGTCTATTCATTTATTCACTGAGAACGATTAAAAGTGTTACCTTGTGAGAGAGCAAAGTGTGAGTTTTGGTGTTTTTCATTTGTTTGAAAGTTTCAATTCTTACCATTACTGCCTTGTCTTGGTTTGAGGCTTTGAGCAGAGAAAAGCTGACGCCTTGGAATATGGTTTACAGCGGTTTCTCTAGGATTTGCAGAGTCACTTCTGAAATATATGGTTGAAAAAGCTTTGGATTTTGTTCAATTGGGTGGCCTGTGCAACTTCTGAAGGCATCAAATTTTTTGTCTCCTTCCCATTTTTTTTTATTTAAAATTTGTTTTCTCCCCTCTACCCCATTTTTCTTCTCTCTCTCCCCCTCTCTTTTTCAGGTATTTTGGTTTTGGTTAGCATTCATTGATTGTACTATGTTCTGTAGCTTGTGAAACTTTTTCTGTACGTTGTATTATAGCTTAACTTTTCTCAAGTGGCTATACTTTGTTGAGTTTGCTTGAAACAATGATTTTCTTTGAGAATTTGGCTTTGGATTAACTTCAAATTTAGAGTTCACGTACCCAATAGATAGTAATATTTGCATTTTAATTTTTTTATGACTGTTAAATTAACATGCCTTCTTATAATTGCAGGGCATATGTTTTCACTCCCCAAGATTCAATTTGAGAGTCTGAATCGTTTTGAGAACATAACCAAACCTTTCTCATTCACTGCATGAGTTGGTGCTAATGGCAAATAGACACCATCCCTCAGTGTTTCTGATGCTGGTTACTATTTTACTTTACATCCATCACACAGAACAACTGCAATCCTCTCACTCTCAGACTCTTCTCAGAATTCAGCAGCTATTGAATTTTCCTGCTTCTTTAAGCAAGTGGAACAACAGCACAGACTTTTGCAACACAGATTCAAACTCTTCCCTCACTGTAGTGTGCTATGAAGACACCATAACACAGCTTCACATAATAGGTGAAAGAAGAGATACACCTCTTCCTCGAAATTTCTCAATAAATTCATTTGTCACAACACTAGTAAAGCTTCCCAGTTTGAAAGTTCTCACATTGGTTTCTCTTGGTATATCGGGTCCTTTGCCTGGTAAGATAGCTCGTTTGTCATCTCTGGAAATAATTAACATGAGTTCCAATTTTCTCTATGGTTCCATTCCTCAGGAACTTTCATCACTGTCAAATCTTCAAACACTCATTTTTGACAACAACATGTTGGCTGACAAGTTTCCTGATTGGTTTGATTCACTTCCAGCGTTAACCGTGCTTAGTTTGAAGAATAATTTGTTCAATGAATCACTACCGAATTCGCTTGGTAATGTGGAGAATTTGAGAACTCTTTCTCTTTCTCATAATCACTTTTATGGTGTGGTGCCTGATTTGAGCCGTTTGACAAATCTTCAAGTGCTTGAATTGGATGATAATGCTTTTGGACCTCAGTTTCCTCAGCTTGGTAACAAGTTGGTTACATTAGTACTAAGAAACAATAGGTTCAGGTCTGGTATTCCTGCTGAATTGAGCTCATATTATCAGCTTGAACGATTGGATATCTCATCAAATGCATTTGTGGGACCATTTCAGCCGGGATTGTTGTCACTTCCTTCTATTACTTATCTGAATATTTCTGGGAACAAATTAACTGGGATGCTGTTTGAGAATCTGTCTTGCAGTTCTGAGCTTGATAGAATTGATTTATCATTAAATCTTTTGACTGGGAGCTTACCTAGATGTTTAGTGTCAAATTCCAGTGATAGGACTGTCCTGTATGCTAGAAATTGTCTAGAAACTTCGAAACAAAATCAGCAGCCGCAGCCATTTTGCCACACTGAAGCCTTAGCTGTTGGAATCTTACCAGAGACAAAGAAGCACAAACAAGTATCTAAGCTAGTTCTTTCCCTTGGCATAGTTGGTGGGACTCTTGGAGGAATAGCACTTGTCTTACTAATTTTCTTTATTGTTAGAAAAGGAAATGCCAGAAGCAAAATGAAGAACCCTCCAACAAGATTAATATCCGAAAATGCTGCTTCTGGTTACACCTCTAAGTTGCTTTCCGATGCAAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCCTGCCAAGTTATCGAAGTTTCTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTCAACACAGCCTATTTAATGGGTGAAGATTCATATGGGAAGATGTACAGAGGTCAACTGAAGAATGGCTCGCTTGTTGCTATTCGATGTGTAGAAATGAAAAAGAGATACAGCACTCAAAACTTTGTGCACCACATTGAACTGATATCAAAGCTCAGGCATCGCCATCTAGTCAGTGCTCTTGGACACTGCTTTGAATGTTCGTTGGATGATTCAAGTGTTAGCAAAGTATTTCTTGTCTTCGAATACGTGCCAAACGGCACACTCAGAAATTGGATCTCTGAGGAGCATGCTAGAAAACCCTTGACTTGGACTCAACGCATAGGGGCTGCAATTGGAGTTGCAAAGGGAATCCAGTTTCTGCATACAGGGATTGTCCCTGGTGTATATTCCAATGATCTCAAGATAGAAGATGTTCTATTGGATCAGAATCTTGTTACAAAAATCAGCAGTTATCACCTTCCTTTGTTATCTAACATGGGAAAGGTTCGGCATGGAAATTCTTCCAGTGGATTAAAAAATTCTAGCAATAATAAAAGTGTAAAGCATGAAGATAAGTCTGATATATACGACTTTGGAGTGATACTACTCGAACTCATTCTAGGAAGGCAAATAAAGACAGTGAATGATGCAGACGCTTTTAGGGATCTGTTGCAAACAAGCTTAGGGGCAGATGAAGAGGGTAGGAGGAGTGTTGTTGACCCAGCAATTCGCAAGGCATGCTTGGATCTATCTTTGAAGACAATGACGGAGATTTGTGTGAGGATGCATGGAGAGGGGATTCTCAAAGTAGTGAAGGGTCACCTGGCTCAGAATCTCGGAGACTTGCCTTCCATTAGAGTCAATCCGCAGAAAGTGATGAGCATGCAAAAGGGTGGTGGCGATTGCACTGAGGGAGCGAAATTGGAACAAGGGGAAGGGGGTAGTAATGAAGGGAGTTCAAGGAAAAGTGAAAAAAGGGGAAGTGGGTCAAATGGTGGAAAGGCAGAAGCATTAGCGTGTGGGGCATGCAAGTACATGAGGAGGAAGTGCGAGAATGAATGCATGTTTGCACCATACTTTCCTTCTGAGAAAGACTCTGCACGGTTTGCAGTGGTGCACAAGGTGTTTGGTAAAAACTGTTTGTTGAAGCTTTTGTCCAATGTTGAAGTGGATCGTCGCCATGAGGTCATGGATTCCTTATGCTACCAGGCTCAGGCAAGGCTCCTTGATCCTGTTTATGGCTGTGTCTCCATCATTACTGCTTTGCAGCAACAGGTGGCATTGTTGCAAGAGCAGCTTGCTATGGTGAATGATCAGCTTATAAATACGGAGATTTTATATGAAACTCTTCTTCAGACCACACAGGAACAGCAACAACCAAACATCAATGTTGCTGTGGAGACAGCATACTCAAACAATTCATCACTTGCACCAGCCAACATGATGAACATTCGCATGTTCAACCCTATTCATCACTTGCACCCTCAACATTGGAGCTTTCTCAATCCTCTGGGCTTCCCCAGCTTGAGGAAGAAATTGGGATTTCCCAATATTTCAATGATGACATTGCACATCTCTTTCTATGAGTTGCCAATTTTACTTAATTTAAGTTGCTGA 3810 0.3979 MANRHHPSVFLMLVTILLYIHHTEQLQSSHSQTLLRIQQLLNFPASLSKWNNSTDFCNTDSNSSLTVVCYEDTITQLHIIGERRDTPLPRNFSINSFVTTLVKLPSLKVLTLVSLGISGPLPGKIARLSSLEIINMSSNFLYGSIPQELSSLSNLQTLIFDNNMLADKFPDWFDSLPALTVLSLKNNLFNESLPNSLGNVENLRTLSLSHNHFYGVVPDLSRLTNLQVLELDDNAFGPQFPQLGNKLVTLVLRNNRFRSGIPAELSSYYQLERLDISSNAFVGPFQPGLLSLPSITYLNISGNKLTGMLFENLSCSSELDRIDLSLNLLTGSLPRCLVSNSSDRTVLYARNCLETSKQNQQPQPFCHTEALAVGILPETKKHKQVSKLVLSLGIVGGTLGGIALVLLIFFIVRKGNARSKMKNPPTRLISENAASGYTSKLLSDARYISQTKKLGAVGLPSYRSFSLEEIEAATNYFNTAYLMGEDSYGKMYRGQLKNGSLVAIRCVEMKKRYSTQNFVHHIELISKLRHRHLVSALGHCFECSLDDSSVSKVFLVFEYVPNGTLRNWISEEHARKPLTWTQRIGAAIGVAKGIQFLHTGIVPGVYSNDLKIEDVLLDQNLVTKISSYHLPLLSNMGKVRHGNSSSGLKNSSNNKSVKHEDKSDIYDFGVILLELILGRQIKTVNDADAFRDLLQTSLGADEEGRRSVVDPAIRKACLDLSLKTMTEICVRMHGEGILKVVKGHLAQNLGDLPSIRVNPQKVMSMQKGGGDCTEGAKLEQGEGGSNEGSSRKSEKRGSGSNGGKAEALACGACKYMRRKCENECMFAPYFPSEKDSARFAVVHKVFGKNCLLKLLSNVEVDRRHEVMDSLCYQAQARLLDPVYGCVSIITALQQQVALLQEQLAMVNDQLINTEILYETLLQTTQEQQQPNINVAVETAYSNNSSLAPANMMNIRMFNPIHHLHPQHWSFLNPLGFPSLRKKLGFPNISMMTLHISFYELPILLNLSC 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01769 1008 MobiDBLite consensus disorder prediction 763 805 - -
Pste5g01769 1008 Coils Coil 889 909 - -
Pste5g01769 1008 Pfam Lateral organ boundaries (LOB) domain 809 907 IPR004883 -
Pste5g01769 1008 SUPERFAMILY Protein kinase-like (PK-like) 459 686 IPR011009 -
Pste5g01769 1008 ProSiteProfiles LOB domain profile. 808 910 IPR004883 -
Pste5g01769 1008 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 245 362 - -
Pste5g01769 1008 ProSiteProfiles Protein kinase domain profile. 477 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01769 1008 SMART LRR_typ_2 292 312 IPR003591 -
Pste5g01769 1008 SMART LRR_typ_2 128 152 IPR003591 -
Pste5g01769 1008 SMART LRR_typ_2 176 199 IPR003591 -
Pste5g01769 1008 SMART LRR_typ_2 200 223 IPR003591 -
Pste5g01769 1008 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Pste5g01769 1008 Gene3D Ribonuclease Inhibitor 242 346 IPR032675 -
Pste5g01769 1008 Pfam Protein tyrosine and serine/threonine kinase 483 679 IPR001245 GO:0004672|GO:0006468
Pste5g01769 1008 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Pste5g01769 1008 SUPERFAMILY L domain-like 32 352 - -
Pste5g01769 1008 Gene3D Transferase(Phosphotransferase) domain 1 561 748 - -
Pste5g01769 1008 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 729 - -
Pste5g01769 1008 Gene3D Ribonuclease Inhibitor 27 241 IPR032675 -
Pste5g01769 1008 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Pste5g01769 1008 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 244 - -
Pste5g01769 1008 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01769 Pste-Chr5 11228691 11240229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01769 43 731 Miscellaneous Gene Families AT3G03770 61.705 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pste5g01769 PK_Tyr_Ser-Thr 7.8e-20 CL0016
TF LOB Pste5g01769 PK_Tyr_Ser-Thr 7.8e-20 CL0016