Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste5g01757 | TTGCTTTATGGTTTCCTCTCTGCATGCTTCTTTCTTCTTTCCCTTTCAATCCCCTGTCAATTCCAAACTTTAAAGTTTATCGATTTGTTTCTTTTCTCCGATTTAGGGTTCAAAATAATTGCATATTTCAAATTCAATTCAATTCTCCATCATCCATTCCTATCTATTACAATCCTTGTTCATTGAGAGAGCAGAGTCCGAAGAAATCAACCATGCCTCGCTACGATGATAAGTATGGTAATACTCGCCTTTACGTTGGGCGTTTGTCTTCGAAGACCCGATCCCGTGATCTGGAGCGTATCTTCAGCCGATACGGAAGTTTCAAGATGATTGTTTTACTGTACCATGTTTGCTTGTGTGTATCTATTTGGATGAATGGCTTTATTGTTATGGTACTTGATTTCTTTCTTAGAGTAGGCAGGATGTTGTCCGTTGGAGCTAAGTTAGTGATAAGTTTCCGTGTGTCGGCCATGATTTATGCTCAAACTTGGGCGATGAAACAGGTTTTTTTCTCAAGCTATGTTTTGAGCTTGGGTTTTATTGGTTATGCCTCATGTTATGTGGGAACCAAATCCTCTAGGTGTCATGTTTCTGGGGTTTTGGCTAAACCTGGAGGTCTGTGGTGGGAGGTTGGCCATGATGGAATTGGTGGAAATTCCTGTCGAGTGTTGACTTTGGCGATTCTTTCTGTAATGTTATTACGTGTTTTTATGGAAATGGCATCAATCACAAACTGGTGTTTATTAAGTAATGATGGCCTTATTGTTTCTGGAAACCATTTCCGCAGAATTCGAGGTGTTGATATGAAGAATGATTTCGCCTTTGTTGATTTTAGTGATCCTAGAGACGCCGATGATGCAAGATATAACTTGGATGGTCGGGATTTTGATGGAAGTCGTCTTATAGTAGAGTTTGCAAAAGGGGCTCCTCGTGGATCCCGGGAATATTTGGGGCGAGGTCCTCCTCCTGGTTCAGGACGCTGCTTTAATTGTGGTCTTGATGGCCATTGGGCACGAGATTGCAAGGCTGGTGATTGGAAGAATAAGTGTTACCGCTGTGGGGATAGAGGTCATATAGAGAGGAACTGCAAGAACAGCCCCAAAAAATTGAGTAGACGTGGACGGAGTTATTCACGTTCACCTGTCAGATCACGTTCACCCGTCAGATCTCGTTCACCTTGTCGTGGTGGAAGCCGGGATAGAAGTTACAGCCGAGATCGCAGCTATAGTCGATCACGATCCCCTGAGAGAAGAGAAGAAAGCCCTGTTCGTGAAGATAGGTCACAAAGCCCTGAAGCCAAAAACAGTCCTCAGCCCTCTAAGGCAAGGAAGCATAGTTCATCACCTGGCCAAAGTAGCCCACAGAAAAGAGATGATACTTCTCCCAGTAATGATAGGATGAGTAGAAGCCCTGCAAGGGACCGTGATGATGGAGACTATGACAGCCCTAAAGTTAATGTTCGTAATGGCAGCCATAGCCATAGCCCCAGGGATGATGACAGGAGCCCTATTGATGATGATGACCACCGTCACTCACCAAGAGCCAGCGAGTCACCTTAAAAAAGTATTGCTCAGAGAACTGGACTACGGATGTGGCTTATAATTTATCTGCTTTGGTTATCTAATATATTTTGAAGTGCGAGACTATTTTTTGGTTAAATGAAACTGTATGAAATGGGTATGGTTAAGACGATTTGTGTATGCTATTTTTCAGTTTAATCTTTTGTTGCAATGTGTGGTTTACAACTAATATAACCTGCCCAAATTTGTGTTGAAAGATTGTGAATTATGAGAAATTTAAATCAACGTG | 1809 | 0.424 | MLLSSFPFNPLSIPNFKVYRFVSFLRFRVQNNCIFQIQFNSPSSIPIYYNPCSLREQSPKKSTMPRYDDKYGNTRLYVGRLSSKTRSRDLERIFSRYGSFKMIVLLYHVCLCVSIWMNGFIVMVLDFFLRVGRMLSVGAKLVISFRVSAMIYAQTWAMKQVFFSSYVLSLGFIGYASCYVGTKSSRCHVSGVLAKPGGLWWEVGHDGIGGNSCRVLTLAILSVMLLRVFMEMASITNWCLLSNDGLIVSGNHFRRIRGVDMKNDFAFVDFSDPRDADDARYNLDGRDFDGSRLIVEFAKGAPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGDRGHIERNCKNSPKKLSRRGRSYSRSPVRSRSPVRSRSPCRGGSRDRSYSRDRSYSRSRSPERREESPVREDRSQSPEAKNSPQPSKARKHSSSPGQSSPQKRDDTSPSNDRMSRSPARDRDDGDYDSPKVNVRNGSHSHSPRDDDRSPIDDDDHRHSPRASESP | 511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste5g01757 | 511 | Pfam | Zinc knuckle | 340 | 357 | IPR001878 | GO:0003676|GO:0008270 | |
| Pste5g01757 | 511 | Pfam | Zinc knuckle | 319 | 334 | IPR001878 | GO:0003676|GO:0008270 | |
| Pste5g01757 | 511 | MobiDBLite | consensus disorder prediction | 353 | 511 | - | - | |
| Pste5g01757 | 511 | MobiDBLite | consensus disorder prediction | 483 | 511 | - | - | |
| Pste5g01757 | 511 | SUPERFAMILY | Retrovirus zinc finger-like domains | 310 | 358 | IPR036875 | GO:0003676|GO:0008270 | |
| Pste5g01757 | 511 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 226 | 300 | IPR000504 | GO:0003723 | |
| Pste5g01757 | 511 | ProSiteProfiles | Zinc finger CCHC-type profile. | 341 | 357 | IPR001878 | GO:0003676|GO:0008270 | |
| Pste5g01757 | 511 | MobiDBLite | consensus disorder prediction | 424 | 450 | - | - | |
| Pste5g01757 | 511 | Gene3D | - | 50 | 110 | IPR012677 | - | |
| Pste5g01757 | 511 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 256 | 293 | IPR000504 | GO:0003723 | |
| Pste5g01757 | 511 | SUPERFAMILY | RNA-binding domain, RBD | 253 | 319 | IPR035979 | GO:0003676 | |
| Pste5g01757 | 511 | MobiDBLite | consensus disorder prediction | 386 | 423 | - | - | |
| Pste5g01757 | 511 | FunFam | serine/arginine-rich splicing factor RS2Z32-like isoform X1 | 310 | 338 | - | - | |
| Pste5g01757 | 511 | Gene3D | - | 244 | 303 | IPR012677 | - | |
| Pste5g01757 | 511 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 74 | 419 | - | - | |
| Pste5g01757 | 511 | SMART | c2hcfinal6 | 319 | 335 | IPR001878 | GO:0003676|GO:0008270 | |
| Pste5g01757 | 511 | SMART | c2hcfinal6 | 341 | 357 | IPR001878 | GO:0003676|GO:0008270 | |
| Pste5g01757 | 511 | MobiDBLite | consensus disorder prediction | 451 | 475 | - | - | |
| Pste5g01757 | 511 | SUPERFAMILY | RNA-binding domain, RBD | 50 | 108 | IPR035979 | GO:0003676 | |
| Pste5g01757 | 511 | Gene3D | - | 304 | 364 | - | - | |
| Pste5g01757 | 511 | ProSiteProfiles | Zinc finger CCHC-type profile. | 319 | 334 | IPR001878 | GO:0003676|GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste5g01757 | Pste-Chr5 | 11158874 | 11161535 | Proximal |